Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7490 | 22693;22694;22695 | chr2:178722319;178722318;178722317 | chr2:179587046;179587045;179587044 |
N2AB | 7173 | 21742;21743;21744 | chr2:178722319;178722318;178722317 | chr2:179587046;179587045;179587044 |
N2A | 6246 | 18961;18962;18963 | chr2:178722319;178722318;178722317 | chr2:179587046;179587045;179587044 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs781659636 | -0.898 | 0.997 | N | 0.683 | 0.384 | 0.799020525514 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/C | rs781659636 | -0.898 | 0.997 | N | 0.683 | 0.384 | 0.799020525514 | gnomAD-4.0.0 | 1.59472E-06 | None | None | None | None | N | None | 0 | 2.28938E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1125 | likely_benign | 0.1125 | benign | -0.942 | Destabilizing | 0.267 | N | 0.421 | neutral | N | 0.494466465 | None | None | N |
S/C | 0.175 | likely_benign | 0.1581 | benign | -0.354 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | N | 0.497304076 | None | None | N |
S/D | 0.5556 | ambiguous | 0.5373 | ambiguous | -0.512 | Destabilizing | 0.842 | D | 0.639 | neutral | None | None | None | None | N |
S/E | 0.6445 | likely_pathogenic | 0.5983 | pathogenic | -0.326 | Destabilizing | 0.842 | D | 0.623 | neutral | None | None | None | None | N |
S/F | 0.1938 | likely_benign | 0.1808 | benign | -0.967 | Destabilizing | 0.966 | D | 0.691 | prob.neutral | N | 0.496543607 | None | None | N |
S/G | 0.1458 | likely_benign | 0.1496 | benign | -1.315 | Destabilizing | 0.688 | D | 0.585 | neutral | None | None | None | None | N |
S/H | 0.3199 | likely_benign | 0.3101 | benign | -1.475 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/I | 0.1359 | likely_benign | 0.1229 | benign | 0.013 | Stabilizing | 0.728 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/K | 0.7145 | likely_pathogenic | 0.6862 | pathogenic | 0.445 | Stabilizing | 0.067 | N | 0.313 | neutral | None | None | None | None | N |
S/L | 0.1233 | likely_benign | 0.1175 | benign | 0.013 | Stabilizing | 0.525 | D | 0.67 | neutral | None | None | None | None | N |
S/M | 0.2309 | likely_benign | 0.2178 | benign | -0.028 | Destabilizing | 0.974 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/N | 0.1529 | likely_benign | 0.1646 | benign | -0.129 | Destabilizing | 0.842 | D | 0.637 | neutral | None | None | None | None | N |
S/P | 0.9662 | likely_pathogenic | 0.9649 | pathogenic | -0.274 | Destabilizing | 0.966 | D | 0.719 | prob.delet. | D | 0.538120941 | None | None | N |
S/Q | 0.5069 | ambiguous | 0.4781 | ambiguous | 0.036 | Stabilizing | 0.949 | D | 0.686 | prob.neutral | None | None | None | None | N |
S/R | 0.5347 | ambiguous | 0.5107 | ambiguous | 0.046 | Stabilizing | 0.728 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/T | 0.0795 | likely_benign | 0.0756 | benign | -0.006 | Destabilizing | 0.022 | N | 0.257 | neutral | N | 0.406231597 | None | None | N |
S/V | 0.176 | likely_benign | 0.1648 | benign | -0.274 | Destabilizing | 0.067 | N | 0.541 | neutral | None | None | None | None | N |
S/W | 0.425 | ambiguous | 0.3957 | ambiguous | -1.02 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/Y | 0.2055 | likely_benign | 0.1971 | benign | -0.607 | Destabilizing | 0.989 | D | 0.689 | prob.neutral | N | 0.493910261 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.