Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7492 | 22699;22700;22701 | chr2:178722313;178722312;178722311 | chr2:179587040;179587039;179587038 |
N2AB | 7175 | 21748;21749;21750 | chr2:178722313;178722312;178722311 | chr2:179587040;179587039;179587038 |
N2A | 6248 | 18967;18968;18969 | chr2:178722313;178722312;178722311 | chr2:179587040;179587039;179587038 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs745460696 | 0.095 | 0.816 | N | 0.542 | 0.239 | 0.589461000006 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
S/L | rs745460696 | 0.095 | 0.816 | N | 0.542 | 0.239 | 0.589461000006 | gnomAD-4.0.0 | 2.05522E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70071E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0903 | likely_benign | 0.0889 | benign | -1.095 | Destabilizing | 0.037 | N | 0.363 | neutral | N | 0.521898401 | None | None | N |
S/C | 0.1642 | likely_benign | 0.1474 | benign | -0.534 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | N |
S/D | 0.4959 | ambiguous | 0.4428 | ambiguous | -0.158 | Destabilizing | 0.884 | D | 0.479 | neutral | None | None | None | None | N |
S/E | 0.5026 | ambiguous | 0.4411 | ambiguous | -0.055 | Destabilizing | 0.815 | D | 0.442 | neutral | None | None | None | None | N |
S/F | 0.1684 | likely_benign | 0.1497 | benign | -1.144 | Destabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | N |
S/G | 0.154 | likely_benign | 0.1548 | benign | -1.417 | Destabilizing | 0.853 | D | 0.434 | neutral | None | None | None | None | N |
S/H | 0.3055 | likely_benign | 0.271 | benign | -1.635 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | N |
S/I | 0.1299 | likely_benign | 0.1218 | benign | -0.301 | Destabilizing | 0.855 | D | 0.534 | neutral | None | None | None | None | N |
S/K | 0.6198 | likely_pathogenic | 0.5691 | pathogenic | -0.102 | Destabilizing | 0.855 | D | 0.408 | neutral | None | None | None | None | N |
S/L | 0.0966 | likely_benign | 0.0951 | benign | -0.301 | Destabilizing | 0.816 | D | 0.542 | neutral | N | 0.479051701 | None | None | N |
S/M | 0.1767 | likely_benign | 0.17 | benign | -0.146 | Destabilizing | 0.995 | D | 0.566 | neutral | None | None | None | None | N |
S/N | 0.1636 | likely_benign | 0.1572 | benign | -0.351 | Destabilizing | 0.472 | N | 0.477 | neutral | None | None | None | None | N |
S/P | 0.932 | likely_pathogenic | 0.9307 | pathogenic | -0.534 | Destabilizing | 0.921 | D | 0.541 | neutral | N | 0.506545743 | None | None | N |
S/Q | 0.4358 | ambiguous | 0.3839 | ambiguous | -0.343 | Destabilizing | 0.966 | D | 0.523 | neutral | None | None | None | None | N |
S/R | 0.4906 | ambiguous | 0.4401 | ambiguous | -0.252 | Destabilizing | 0.036 | N | 0.346 | neutral | None | None | None | None | N |
S/T | 0.0646 | likely_benign | 0.0639 | benign | -0.375 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.404225868 | None | None | N |
S/V | 0.1458 | likely_benign | 0.1391 | benign | -0.534 | Destabilizing | 0.02 | N | 0.485 | neutral | None | None | None | None | N |
S/W | 0.3612 | ambiguous | 0.3205 | benign | -1.09 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
S/Y | 0.177 | likely_benign | 0.1612 | benign | -0.776 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.