Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7542 | 22849;22850;22851 | chr2:178722039;178722038;178722037 | chr2:179586766;179586765;179586764 |
N2AB | 7225 | 21898;21899;21900 | chr2:178722039;178722038;178722037 | chr2:179586766;179586765;179586764 |
N2A | 6298 | 19117;19118;19119 | chr2:178722039;178722038;178722037 | chr2:179586766;179586765;179586764 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.003 | N | 0.153 | 0.255 | 0.112648838833 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4346E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1666 | likely_benign | 0.1742 | benign | -0.12 | Destabilizing | 0.002 | N | 0.092 | neutral | None | None | None | None | I |
Q/C | 0.8079 | likely_pathogenic | 0.8255 | pathogenic | 0.124 | Stabilizing | 0.965 | D | 0.329 | neutral | None | None | None | None | I |
Q/D | 0.3639 | ambiguous | 0.3894 | ambiguous | -0.08 | Destabilizing | 0.002 | N | 0.152 | neutral | None | None | None | None | I |
Q/E | 0.0777 | likely_benign | 0.0795 | benign | -0.131 | Destabilizing | 0.166 | N | 0.285 | neutral | N | 0.439415877 | None | None | I |
Q/F | 0.6592 | likely_pathogenic | 0.6674 | pathogenic | -0.443 | Destabilizing | 0.818 | D | 0.401 | neutral | None | None | None | None | I |
Q/G | 0.3107 | likely_benign | 0.3323 | benign | -0.257 | Destabilizing | 0.345 | N | 0.253 | neutral | None | None | None | None | I |
Q/H | 0.2606 | likely_benign | 0.2871 | benign | -0.066 | Destabilizing | 0.954 | D | 0.421 | neutral | N | 0.447883432 | None | None | I |
Q/I | 0.3605 | ambiguous | 0.3595 | ambiguous | 0.147 | Stabilizing | 0.39 | N | 0.339 | neutral | None | None | None | None | I |
Q/K | 0.1159 | likely_benign | 0.1248 | benign | 0.054 | Stabilizing | 0.285 | N | 0.349 | neutral | N | 0.4429949 | None | None | I |
Q/L | 0.1191 | likely_benign | 0.1236 | benign | 0.147 | Stabilizing | 0.001 | N | 0.097 | neutral | N | 0.417003165 | None | None | I |
Q/M | 0.3563 | ambiguous | 0.3557 | ambiguous | 0.244 | Stabilizing | 0.047 | N | 0.221 | neutral | None | None | None | None | I |
Q/N | 0.3175 | likely_benign | 0.323 | benign | -0.099 | Destabilizing | 0.561 | D | 0.395 | neutral | None | None | None | None | I |
Q/P | 0.092 | likely_benign | 0.101 | benign | 0.083 | Stabilizing | 0.003 | N | 0.153 | neutral | N | 0.250026814 | None | None | I |
Q/R | 0.1356 | likely_benign | 0.1489 | benign | 0.276 | Stabilizing | 0.662 | D | 0.409 | neutral | N | 0.456521558 | None | None | I |
Q/S | 0.2103 | likely_benign | 0.2238 | benign | -0.118 | Destabilizing | 0.209 | N | 0.305 | neutral | None | None | None | None | I |
Q/T | 0.2176 | likely_benign | 0.2209 | benign | -0.04 | Destabilizing | 0.345 | N | 0.305 | neutral | None | None | None | None | I |
Q/V | 0.2246 | likely_benign | 0.2238 | benign | 0.083 | Stabilizing | 0.209 | N | 0.247 | neutral | None | None | None | None | I |
Q/W | 0.5918 | likely_pathogenic | 0.637 | pathogenic | -0.481 | Destabilizing | 0.991 | D | 0.311 | neutral | None | None | None | None | I |
Q/Y | 0.4684 | ambiguous | 0.4911 | ambiguous | -0.208 | Destabilizing | 0.965 | D | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.