Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7552 | 22879;22880;22881 | chr2:178722009;178722008;178722007 | chr2:179586736;179586735;179586734 |
N2AB | 7235 | 21928;21929;21930 | chr2:178722009;178722008;178722007 | chr2:179586736;179586735;179586734 |
N2A | 6308 | 19147;19148;19149 | chr2:178722009;178722008;178722007 | chr2:179586736;179586735;179586734 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1171381654 | 0.053 | None | N | 0.122 | 0.106 | 0.168933306366 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/D | rs1171381654 | 0.053 | None | N | 0.122 | 0.106 | 0.168933306366 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43357E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1988 | likely_benign | 0.2228 | benign | -0.181 | Destabilizing | 0.01 | N | 0.275 | neutral | None | None | None | None | N |
N/C | 0.3548 | ambiguous | 0.3848 | ambiguous | 0.381 | Stabilizing | 0.976 | D | 0.386 | neutral | None | None | None | None | N |
N/D | 0.1073 | likely_benign | 0.1143 | benign | 0.05 | Stabilizing | None | N | 0.122 | neutral | N | 0.440180229 | None | None | N |
N/E | 0.2708 | likely_benign | 0.3035 | benign | -0.014 | Destabilizing | 0.006 | N | 0.136 | neutral | None | None | None | None | N |
N/F | 0.497 | ambiguous | 0.546 | ambiguous | -0.729 | Destabilizing | 0.927 | D | 0.394 | neutral | None | None | None | None | N |
N/G | 0.1363 | likely_benign | 0.1554 | benign | -0.29 | Destabilizing | 0.002 | N | 0.113 | neutral | None | None | None | None | N |
N/H | 0.0911 | likely_benign | 0.0982 | benign | -0.377 | Destabilizing | 0.002 | N | 0.136 | neutral | N | 0.479144049 | None | None | N |
N/I | 0.3179 | likely_benign | 0.3593 | ambiguous | 0.012 | Stabilizing | 0.916 | D | 0.403 | neutral | N | 0.480014567 | None | None | N |
N/K | 0.1933 | likely_benign | 0.2149 | benign | 0.198 | Stabilizing | 0.575 | D | 0.217 | neutral | N | 0.471561928 | None | None | N |
N/L | 0.2709 | likely_benign | 0.2983 | benign | 0.012 | Stabilizing | 0.576 | D | 0.444 | neutral | None | None | None | None | N |
N/M | 0.3192 | likely_benign | 0.3573 | ambiguous | 0.319 | Stabilizing | 0.982 | D | 0.341 | neutral | None | None | None | None | N |
N/P | 0.7963 | likely_pathogenic | 0.8131 | pathogenic | -0.029 | Destabilizing | 0.757 | D | 0.399 | neutral | None | None | None | None | N |
N/Q | 0.1954 | likely_benign | 0.2193 | benign | -0.168 | Destabilizing | 0.401 | N | 0.291 | neutral | None | None | None | None | N |
N/R | 0.2248 | likely_benign | 0.2541 | benign | 0.277 | Stabilizing | 0.642 | D | 0.288 | neutral | None | None | None | None | N |
N/S | 0.0715 | likely_benign | 0.0771 | benign | 0.092 | Stabilizing | 0.043 | N | 0.291 | neutral | N | 0.481893565 | None | None | N |
N/T | 0.1458 | likely_benign | 0.163 | benign | 0.144 | Stabilizing | 0.254 | N | 0.228 | neutral | N | 0.481144204 | None | None | N |
N/V | 0.3165 | likely_benign | 0.3602 | ambiguous | -0.029 | Destabilizing | 0.102 | N | 0.466 | neutral | None | None | None | None | N |
N/W | 0.6952 | likely_pathogenic | 0.737 | pathogenic | -0.804 | Destabilizing | 0.993 | D | 0.425 | neutral | None | None | None | None | N |
N/Y | 0.1881 | likely_benign | 0.209 | benign | -0.5 | Destabilizing | 0.826 | D | 0.388 | neutral | N | 0.511640469 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.