Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7557 | 22894;22895;22896 | chr2:178721994;178721993;178721992 | chr2:179586721;179586720;179586719 |
N2AB | 7240 | 21943;21944;21945 | chr2:178721994;178721993;178721992 | chr2:179586721;179586720;179586719 |
N2A | 6313 | 19162;19163;19164 | chr2:178721994;178721993;178721992 | chr2:179586721;179586720;179586719 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs758231381 | -0.12 | 0.001 | N | 0.145 | 0.179 | 0.313210971179 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
P/T | rs758231381 | -0.12 | 0.001 | N | 0.145 | 0.179 | 0.313210971179 | gnomAD-4.0.0 | 6.36752E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73296E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0718 | likely_benign | 0.0931 | benign | -0.418 | Destabilizing | 0.036 | N | 0.224 | neutral | N | 0.415232296 | None | None | N |
P/C | 0.6613 | likely_pathogenic | 0.7614 | pathogenic | -0.745 | Destabilizing | 0.978 | D | 0.344 | neutral | None | None | None | None | N |
P/D | 0.6097 | likely_pathogenic | 0.7637 | pathogenic | -0.331 | Destabilizing | 0.118 | N | 0.32 | neutral | None | None | None | None | N |
P/E | 0.3663 | ambiguous | 0.5073 | ambiguous | -0.426 | Destabilizing | 0.175 | N | 0.325 | neutral | None | None | None | None | N |
P/F | 0.5315 | ambiguous | 0.6911 | pathogenic | -0.607 | Destabilizing | 0.98 | D | 0.372 | neutral | None | None | None | None | N |
P/G | 0.3179 | likely_benign | 0.428 | ambiguous | -0.543 | Destabilizing | 0.36 | N | 0.327 | neutral | None | None | None | None | N |
P/H | 0.2553 | likely_benign | 0.3663 | ambiguous | -0.076 | Destabilizing | 0.976 | D | 0.34 | neutral | N | 0.498773612 | None | None | N |
P/I | 0.3449 | ambiguous | 0.4848 | ambiguous | -0.23 | Destabilizing | 0.871 | D | 0.418 | neutral | None | None | None | None | N |
P/K | 0.3938 | ambiguous | 0.5498 | ambiguous | -0.479 | Destabilizing | 0.871 | D | 0.325 | neutral | None | None | None | None | N |
P/L | 0.128 | likely_benign | 0.1985 | benign | -0.23 | Destabilizing | 0.719 | D | 0.382 | neutral | N | 0.474357957 | None | None | N |
P/M | 0.2933 | likely_benign | 0.4034 | ambiguous | -0.507 | Destabilizing | 0.982 | D | 0.341 | neutral | None | None | None | None | N |
P/N | 0.3586 | ambiguous | 0.5005 | ambiguous | -0.292 | Destabilizing | 0.457 | N | 0.387 | neutral | None | None | None | None | N |
P/Q | 0.1815 | likely_benign | 0.2685 | benign | -0.483 | Destabilizing | 0.947 | D | 0.344 | neutral | None | None | None | None | N |
P/R | 0.2595 | likely_benign | 0.3901 | ambiguous | -0.014 | Destabilizing | 0.947 | D | 0.402 | neutral | N | 0.466565193 | None | None | N |
P/S | 0.1174 | likely_benign | 0.1652 | benign | -0.626 | Destabilizing | 0.023 | N | 0.157 | neutral | N | 0.390448495 | None | None | N |
P/T | 0.0838 | likely_benign | 0.1153 | benign | -0.619 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.429681673 | None | None | N |
P/V | 0.227 | likely_benign | 0.3145 | benign | -0.26 | Destabilizing | 0.372 | N | 0.359 | neutral | None | None | None | None | N |
P/W | 0.7026 | likely_pathogenic | 0.8221 | pathogenic | -0.698 | Destabilizing | 0.998 | D | 0.37 | neutral | None | None | None | None | N |
P/Y | 0.5246 | ambiguous | 0.6745 | pathogenic | -0.407 | Destabilizing | 0.993 | D | 0.365 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.