Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7561 | 22906;22907;22908 | chr2:178721982;178721981;178721980 | chr2:179586709;179586708;179586707 |
N2AB | 7244 | 21955;21956;21957 | chr2:178721982;178721981;178721980 | chr2:179586709;179586708;179586707 |
N2A | 6317 | 19174;19175;19176 | chr2:178721982;178721981;178721980 | chr2:179586709;179586708;179586707 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs786205544 | None | 1.0 | N | 0.792 | 0.505 | 0.754199488981 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs786205544 | None | 1.0 | N | 0.792 | 0.505 | 0.754199488981 | gnomAD-4.0.0 | 2.47909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54315E-06 | 0 | 1.60143E-05 |
Y/H | None | None | 0.999 | N | 0.711 | 0.472 | 0.598713980857 | gnomAD-4.0.0 | 1.71075E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24897E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9388 | likely_pathogenic | 0.9627 | pathogenic | -2.856 | Highly Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
Y/C | 0.5628 | ambiguous | 0.5905 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.792 | deleterious | N | 0.497319486 | None | None | N |
Y/D | 0.9581 | likely_pathogenic | 0.9752 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.518564066 | None | None | N |
Y/E | 0.9869 | likely_pathogenic | 0.9925 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Y/F | 0.1815 | likely_benign | 0.1754 | benign | -1.15 | Destabilizing | 0.073 | N | 0.322 | neutral | N | 0.451385097 | None | None | N |
Y/G | 0.9375 | likely_pathogenic | 0.9622 | pathogenic | -3.27 | Highly Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
Y/H | 0.7279 | likely_pathogenic | 0.7475 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.505931658 | None | None | N |
Y/I | 0.7918 | likely_pathogenic | 0.8571 | pathogenic | -1.527 | Destabilizing | 0.95 | D | 0.675 | neutral | None | None | None | None | N |
Y/K | 0.9777 | likely_pathogenic | 0.985 | pathogenic | -2.019 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
Y/L | 0.8098 | likely_pathogenic | 0.8705 | pathogenic | -1.527 | Destabilizing | 0.845 | D | 0.474 | neutral | None | None | None | None | N |
Y/M | 0.8998 | likely_pathogenic | 0.9308 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/N | 0.8006 | likely_pathogenic | 0.8626 | pathogenic | -2.64 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.514689725 | None | None | N |
Y/P | 0.9946 | likely_pathogenic | 0.9971 | pathogenic | -1.977 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/Q | 0.9637 | likely_pathogenic | 0.977 | pathogenic | -2.407 | Highly Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
Y/R | 0.9314 | likely_pathogenic | 0.9526 | pathogenic | -1.727 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Y/S | 0.8133 | likely_pathogenic | 0.8773 | pathogenic | -3.176 | Highly Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.499445853 | None | None | N |
Y/T | 0.8941 | likely_pathogenic | 0.9402 | pathogenic | -2.879 | Highly Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
Y/V | 0.6661 | likely_pathogenic | 0.76 | pathogenic | -1.977 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
Y/W | 0.7938 | likely_pathogenic | 0.8147 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.