Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7562 | 22909;22910;22911 | chr2:178721979;178721978;178721977 | chr2:179586706;179586705;179586704 |
N2AB | 7245 | 21958;21959;21960 | chr2:178721979;178721978;178721977 | chr2:179586706;179586705;179586704 |
N2A | 6318 | 19177;19178;19179 | chr2:178721979;178721978;178721977 | chr2:179586706;179586705;179586704 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1553909660 | None | 0.642 | N | 0.428 | 0.203 | 0.506373324096 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1553909660 | None | 0.642 | N | 0.428 | 0.203 | 0.506373324096 | gnomAD-4.0.0 | 1.31439E-05 | None | None | None | None | N | None | 4.82486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/R | None | None | 0.002 | N | 0.218 | 0.268 | 0.504297271243 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0844 | likely_benign | 0.0923 | benign | -0.994 | Destabilizing | 0.002 | N | 0.124 | neutral | N | 0.519300813 | None | None | N |
T/C | 0.5049 | ambiguous | 0.5312 | ambiguous | -0.654 | Destabilizing | 0.944 | D | 0.431 | neutral | None | None | None | None | N |
T/D | 0.4028 | ambiguous | 0.4929 | ambiguous | -0.269 | Destabilizing | 0.329 | N | 0.399 | neutral | None | None | None | None | N |
T/E | 0.3049 | likely_benign | 0.355 | ambiguous | -0.175 | Destabilizing | 0.329 | N | 0.37 | neutral | None | None | None | None | N |
T/F | 0.2536 | likely_benign | 0.287 | benign | -0.822 | Destabilizing | 0.007 | N | 0.338 | neutral | None | None | None | None | N |
T/G | 0.3399 | likely_benign | 0.3971 | ambiguous | -1.335 | Destabilizing | 0.329 | N | 0.389 | neutral | None | None | None | None | N |
T/H | 0.2035 | likely_benign | 0.2268 | benign | -1.494 | Destabilizing | 0.944 | D | 0.507 | neutral | None | None | None | None | N |
T/I | 0.1441 | likely_benign | 0.1726 | benign | -0.146 | Destabilizing | 0.642 | D | 0.428 | neutral | N | 0.496637384 | None | None | N |
T/K | 0.1859 | likely_benign | 0.1992 | benign | -0.533 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.434161986 | None | None | N |
T/L | 0.0981 | likely_benign | 0.1088 | benign | -0.146 | Destabilizing | 0.329 | N | 0.384 | neutral | None | None | None | None | N |
T/M | 0.0861 | likely_benign | 0.0883 | benign | -0.07 | Destabilizing | 0.981 | D | 0.44 | neutral | None | None | None | None | N |
T/N | 0.1067 | likely_benign | 0.1286 | benign | -0.76 | Destabilizing | 0.003 | N | 0.096 | neutral | None | None | None | None | N |
T/P | 0.5886 | likely_pathogenic | 0.6836 | pathogenic | -0.396 | Destabilizing | 0.784 | D | 0.48 | neutral | N | 0.487618567 | None | None | N |
T/Q | 0.1817 | likely_benign | 0.1917 | benign | -0.747 | Destabilizing | 0.704 | D | 0.433 | neutral | None | None | None | None | N |
T/R | 0.1445 | likely_benign | 0.1627 | benign | -0.533 | Destabilizing | 0.002 | N | 0.218 | neutral | N | 0.410151763 | None | None | N |
T/S | 0.1044 | likely_benign | 0.1209 | benign | -1.112 | Destabilizing | 0.139 | N | 0.281 | neutral | N | 0.456212127 | None | None | N |
T/V | 0.1229 | likely_benign | 0.1418 | benign | -0.396 | Destabilizing | 0.329 | N | 0.259 | neutral | None | None | None | None | N |
T/W | 0.6199 | likely_pathogenic | 0.6483 | pathogenic | -0.778 | Destabilizing | 0.995 | D | 0.499 | neutral | None | None | None | None | N |
T/Y | 0.2753 | likely_benign | 0.2922 | benign | -0.494 | Destabilizing | 0.543 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.