Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7569 | 22930;22931;22932 | chr2:178721958;178721957;178721956 | chr2:179586685;179586684;179586683 |
N2AB | 7252 | 21979;21980;21981 | chr2:178721958;178721957;178721956 | chr2:179586685;179586684;179586683 |
N2A | 6325 | 19198;19199;19200 | chr2:178721958;178721957;178721956 | chr2:179586685;179586684;179586683 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1198203479 | 0.674 | 0.044 | N | 0.347 | 0.276 | 0.438170831126 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1198203479 | 0.674 | 0.044 | N | 0.347 | 0.276 | 0.438170831126 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1198203479 | 0.674 | 0.044 | N | 0.347 | 0.276 | 0.438170831126 | gnomAD-4.0.0 | 6.57237E-06 | None | None | None | None | N | None | 0 | 6.5505E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1275 | likely_benign | 0.1227 | benign | -0.411 | Destabilizing | 0.083 | N | 0.512 | neutral | N | 0.506064944 | None | None | N |
T/C | 0.6608 | likely_pathogenic | 0.6088 | pathogenic | -0.211 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/D | 0.5263 | ambiguous | 0.5089 | ambiguous | -1.421 | Destabilizing | 0.862 | D | 0.664 | neutral | None | None | None | None | N |
T/E | 0.3598 | ambiguous | 0.361 | ambiguous | -1.376 | Destabilizing | 0.954 | D | 0.673 | neutral | None | None | None | None | N |
T/F | 0.2595 | likely_benign | 0.2421 | benign | -0.371 | Destabilizing | 0.987 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/G | 0.5128 | ambiguous | 0.4863 | ambiguous | -0.716 | Destabilizing | 0.882 | D | 0.65 | neutral | None | None | None | None | N |
T/H | 0.2811 | likely_benign | 0.2801 | benign | -1.251 | Destabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/I | 0.0937 | likely_benign | 0.0906 | benign | 0.327 | Stabilizing | 0.044 | N | 0.347 | neutral | N | 0.471066936 | None | None | N |
T/K | 0.1772 | likely_benign | 0.1744 | benign | -0.836 | Destabilizing | 0.936 | D | 0.668 | neutral | None | None | None | None | N |
T/L | 0.0991 | likely_benign | 0.0969 | benign | 0.327 | Stabilizing | 0.807 | D | 0.561 | neutral | None | None | None | None | N |
T/M | 0.0894 | likely_benign | 0.0872 | benign | 0.692 | Stabilizing | 0.991 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/N | 0.1735 | likely_benign | 0.1636 | benign | -1.067 | Destabilizing | 0.703 | D | 0.596 | neutral | N | 0.466295834 | None | None | N |
T/P | 0.502 | ambiguous | 0.4622 | ambiguous | 0.113 | Stabilizing | 0.906 | D | 0.72 | prob.delet. | N | 0.514916501 | None | None | N |
T/Q | 0.2298 | likely_benign | 0.2378 | benign | -1.127 | Destabilizing | 0.932 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/R | 0.1529 | likely_benign | 0.1532 | benign | -0.748 | Destabilizing | 0.987 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/S | 0.158 | likely_benign | 0.1564 | benign | -1.032 | Destabilizing | 0.006 | N | 0.256 | neutral | N | 0.42806552 | None | None | N |
T/V | 0.108 | likely_benign | 0.1083 | benign | 0.113 | Stabilizing | 0.749 | D | 0.522 | neutral | None | None | None | None | N |
T/W | 0.668 | likely_pathogenic | 0.6429 | pathogenic | -0.568 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.3107 | likely_benign | 0.28 | benign | -0.246 | Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.