Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7573 | 22942;22943;22944 | chr2:178721946;178721945;178721944 | chr2:179586673;179586672;179586671 |
N2AB | 7256 | 21991;21992;21993 | chr2:178721946;178721945;178721944 | chr2:179586673;179586672;179586671 |
N2A | 6329 | 19210;19211;19212 | chr2:178721946;178721945;178721944 | chr2:179586673;179586672;179586671 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.514 | N | 0.496 | 0.367 | 0.319114376414 | gnomAD-4.0.0 | 6.84324E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87266E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4651 | ambiguous | 0.5282 | ambiguous | -1.068 | Destabilizing | 0.737 | D | 0.455 | neutral | None | None | None | None | N |
R/C | 0.2159 | likely_benign | 0.2126 | benign | -1.022 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
R/D | 0.7762 | likely_pathogenic | 0.831 | pathogenic | -0.221 | Destabilizing | 0.773 | D | 0.558 | neutral | None | None | None | None | N |
R/E | 0.4023 | ambiguous | 0.4406 | ambiguous | -0.092 | Destabilizing | 0.083 | N | 0.315 | neutral | None | None | None | None | N |
R/F | 0.6292 | likely_pathogenic | 0.6846 | pathogenic | -0.895 | Destabilizing | 0.98 | D | 0.542 | neutral | None | None | None | None | N |
R/G | 0.3976 | ambiguous | 0.4627 | ambiguous | -1.386 | Destabilizing | 0.912 | D | 0.561 | neutral | N | 0.498218085 | None | None | N |
R/H | 0.0843 | likely_benign | 0.0923 | benign | -1.556 | Destabilizing | 0.993 | D | 0.485 | neutral | None | None | None | None | N |
R/I | 0.3034 | likely_benign | 0.3297 | benign | -0.206 | Destabilizing | 0.064 | N | 0.519 | neutral | N | 0.447422072 | None | None | N |
R/K | 0.0941 | likely_benign | 0.0918 | benign | -1.073 | Destabilizing | 0.028 | N | 0.301 | neutral | N | 0.477302262 | None | None | N |
R/L | 0.2725 | likely_benign | 0.3241 | benign | -0.206 | Destabilizing | 0.584 | D | 0.493 | neutral | None | None | None | None | N |
R/M | 0.265 | likely_benign | 0.2923 | benign | -0.454 | Destabilizing | 0.98 | D | 0.527 | neutral | None | None | None | None | N |
R/N | 0.5617 | ambiguous | 0.6078 | pathogenic | -0.503 | Destabilizing | 0.932 | D | 0.455 | neutral | None | None | None | None | N |
R/P | 0.9695 | likely_pathogenic | 0.9814 | pathogenic | -0.474 | Destabilizing | 0.977 | D | 0.579 | neutral | None | None | None | None | N |
R/Q | 0.0904 | likely_benign | 0.097 | benign | -0.701 | Destabilizing | 0.872 | D | 0.459 | neutral | None | None | None | None | N |
R/S | 0.4496 | ambiguous | 0.518 | ambiguous | -1.359 | Destabilizing | 0.514 | D | 0.496 | neutral | N | 0.487172539 | None | None | N |
R/T | 0.1691 | likely_benign | 0.1924 | benign | -1.043 | Destabilizing | 0.028 | N | 0.382 | neutral | N | 0.432873907 | None | None | N |
R/V | 0.3643 | ambiguous | 0.3983 | ambiguous | -0.474 | Destabilizing | 0.584 | D | 0.503 | neutral | None | None | None | None | N |
R/W | 0.248 | likely_benign | 0.2986 | benign | -0.478 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | N |
R/Y | 0.4594 | ambiguous | 0.5166 | ambiguous | -0.199 | Destabilizing | 0.993 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.