Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7574 | 22945;22946;22947 | chr2:178721943;178721942;178721941 | chr2:179586670;179586669;179586668 |
N2AB | 7257 | 21994;21995;21996 | chr2:178721943;178721942;178721941 | chr2:179586670;179586669;179586668 |
N2A | 6330 | 19213;19214;19215 | chr2:178721943;178721942;178721941 | chr2:179586670;179586669;179586668 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1017841481 | -1.727 | 0.011 | D | 0.248 | 0.345 | 0.558422169324 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1017841481 | -1.727 | 0.011 | D | 0.248 | 0.345 | 0.558422169324 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.23E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1017841481 | -1.727 | 0.011 | D | 0.248 | 0.345 | 0.558422169324 | gnomAD-4.0.0 | 4.05965E-06 | None | None | None | None | N | None | 6.98666E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9728 | likely_pathogenic | 0.9822 | pathogenic | -2.988 | Highly Destabilizing | 0.702 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/C | 0.9715 | likely_pathogenic | 0.9785 | pathogenic | -2.272 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
I/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -3.555 | Highly Destabilizing | 0.996 | D | 0.89 | deleterious | None | None | None | None | N |
I/E | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -3.233 | Highly Destabilizing | 0.988 | D | 0.887 | deleterious | None | None | None | None | N |
I/F | 0.672 | likely_pathogenic | 0.7583 | pathogenic | -1.784 | Destabilizing | 0.968 | D | 0.729 | prob.delet. | D | 0.555076665 | None | None | N |
I/G | 0.9939 | likely_pathogenic | 0.9962 | pathogenic | -3.608 | Highly Destabilizing | 0.988 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9909 | likely_pathogenic | 0.9941 | pathogenic | -3.221 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
I/K | 0.9919 | likely_pathogenic | 0.994 | pathogenic | -2.226 | Highly Destabilizing | 0.988 | D | 0.886 | deleterious | None | None | None | None | N |
I/L | 0.2973 | likely_benign | 0.3338 | benign | -1.121 | Destabilizing | 0.011 | N | 0.313 | neutral | D | 0.560805702 | None | None | N |
I/M | 0.4453 | ambiguous | 0.5052 | ambiguous | -1.33 | Destabilizing | 0.968 | D | 0.7 | prob.neutral | D | 0.597855681 | None | None | N |
I/N | 0.9706 | likely_pathogenic | 0.9781 | pathogenic | -2.91 | Highly Destabilizing | 0.995 | D | 0.887 | deleterious | D | 0.650344534 | None | None | N |
I/P | 0.9959 | likely_pathogenic | 0.9974 | pathogenic | -1.734 | Destabilizing | 0.996 | D | 0.888 | deleterious | None | None | None | None | N |
I/Q | 0.9911 | likely_pathogenic | 0.9943 | pathogenic | -2.572 | Highly Destabilizing | 0.996 | D | 0.901 | deleterious | None | None | None | None | N |
I/R | 0.9885 | likely_pathogenic | 0.9919 | pathogenic | -2.202 | Highly Destabilizing | 0.988 | D | 0.889 | deleterious | None | None | None | None | N |
I/S | 0.9751 | likely_pathogenic | 0.9839 | pathogenic | -3.529 | Highly Destabilizing | 0.984 | D | 0.838 | deleterious | D | 0.634325174 | None | None | N |
I/T | 0.9783 | likely_pathogenic | 0.9853 | pathogenic | -3.041 | Highly Destabilizing | 0.896 | D | 0.762 | deleterious | D | 0.633921565 | None | None | N |
I/V | 0.1259 | likely_benign | 0.1383 | benign | -1.734 | Destabilizing | 0.011 | N | 0.248 | neutral | D | 0.575511276 | None | None | N |
I/W | 0.9913 | likely_pathogenic | 0.9945 | pathogenic | -2.195 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
I/Y | 0.956 | likely_pathogenic | 0.9723 | pathogenic | -2.008 | Highly Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.