Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC757522948;22949;22950 chr2:178721940;178721939;178721938chr2:179586667;179586666;179586665
N2AB725821997;21998;21999 chr2:178721940;178721939;178721938chr2:179586667;179586666;179586665
N2A633119216;19217;19218 chr2:178721940;178721939;178721938chr2:179586667;179586666;179586665
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-60
  • Domain position: 61
  • Structural Position: 141
  • Q(SASA): 0.2597
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P None None 0.999 N 0.719 0.487 0.832360729247 gnomAD-4.0.0 1.20032E-06 None None None None N None 6.33473E-05 0 None 0 0 None 0 0 0 0 0
L/V rs774759859 -1.238 0.597 N 0.515 0.256 0.566774491594 gnomAD-2.1.1 1.43E-05 None None None None N None 0 0 None 0 1.53657E-04 None 0 None 0 7.82E-06 0
L/V rs774759859 -1.238 0.597 N 0.515 0.256 0.566774491594 gnomAD-3.1.2 1.97E-05 None None None None N None 0 0 0 0 3.861E-04 None 0 0 1.47E-05 0 0
L/V rs774759859 -1.238 0.597 N 0.515 0.256 0.566774491594 gnomAD-4.0.0 7.68898E-06 None None None None N None 0 0 None 0 9.69838E-05 None 0 0 4.78794E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3977 ambiguous 0.4294 ambiguous -1.257 Destabilizing 0.99 D 0.527 neutral None None None None N
L/C 0.7449 likely_pathogenic 0.7522 pathogenic -0.887 Destabilizing 1.0 D 0.633 neutral None None None None N
L/D 0.8473 likely_pathogenic 0.8551 pathogenic -0.274 Destabilizing 0.994 D 0.661 neutral None None None None N
L/E 0.554 ambiguous 0.5825 pathogenic -0.308 Destabilizing 0.992 D 0.628 neutral None None None None N
L/F 0.1781 likely_benign 0.1988 benign -0.941 Destabilizing 0.991 D 0.546 neutral N 0.50229392 None None N
L/G 0.6586 likely_pathogenic 0.6913 pathogenic -1.516 Destabilizing 0.997 D 0.635 neutral None None None None N
L/H 0.3016 likely_benign 0.3384 benign -0.627 Destabilizing 0.999 D 0.708 prob.delet. N 0.501677844 None None N
L/I 0.1139 likely_benign 0.1204 benign -0.655 Destabilizing 0.53 D 0.477 neutral N 0.509835968 None None N
L/K 0.4027 ambiguous 0.4254 ambiguous -0.607 Destabilizing 0.599 D 0.597 neutral None None None None N
L/M 0.1427 likely_benign 0.1525 benign -0.544 Destabilizing 0.714 D 0.379 neutral None None None None N
L/N 0.4695 ambiguous 0.4817 ambiguous -0.41 Destabilizing 0.759 D 0.421 neutral None None None None N
L/P 0.5963 likely_pathogenic 0.6305 pathogenic -0.822 Destabilizing 0.999 D 0.719 prob.delet. N 0.498002821 None None N
L/Q 0.1734 likely_benign 0.1998 benign -0.629 Destabilizing 0.791 D 0.447 neutral None None None None N
L/R 0.2783 likely_benign 0.3346 benign -0.042 Destabilizing 0.991 D 0.666 neutral N 0.454403973 None None N
L/S 0.3597 ambiguous 0.3909 ambiguous -1.08 Destabilizing 0.99 D 0.59 neutral None None None None N
L/T 0.299 likely_benign 0.3305 benign -0.999 Destabilizing 0.968 D 0.525 neutral None None None None N
L/V 0.1222 likely_benign 0.1363 benign -0.822 Destabilizing 0.597 D 0.515 neutral N 0.511009404 None None N
L/W 0.3389 likely_benign 0.3785 ambiguous -0.907 Destabilizing 1.0 D 0.725 prob.delet. None None None None N
L/Y 0.4698 ambiguous 0.5095 ambiguous -0.675 Destabilizing 0.99 D 0.633 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.