Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7582 | 22969;22970;22971 | chr2:178721919;178721918;178721917 | chr2:179586646;179586645;179586644 |
N2AB | 7265 | 22018;22019;22020 | chr2:178721919;178721918;178721917 | chr2:179586646;179586645;179586644 |
N2A | 6338 | 19237;19238;19239 | chr2:178721919;178721918;178721917 | chr2:179586646;179586645;179586644 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs768179623 | -0.619 | 0.883 | N | 0.695 | 0.476 | 0.634587441147 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 4.45E-05 | 0 |
S/C | rs768179623 | -0.619 | 0.883 | N | 0.695 | 0.476 | 0.634587441147 | gnomAD-4.0.0 | 1.02655E-05 | None | None | None | None | N | None | 0 | 2.23634E-05 | None | 0 | 0 | None | 0 | 0 | 1.25953E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0694 | likely_benign | 0.068 | benign | -0.726 | Destabilizing | 0.055 | N | 0.452 | neutral | N | 0.451654456 | None | None | N |
S/C | 0.18 | likely_benign | 0.1985 | benign | -0.383 | Destabilizing | 0.883 | D | 0.695 | prob.neutral | N | 0.519729382 | None | None | N |
S/D | 0.7134 | likely_pathogenic | 0.6926 | pathogenic | 0.249 | Stabilizing | 0.272 | N | 0.509 | neutral | None | None | None | None | N |
S/E | 0.7338 | likely_pathogenic | 0.7233 | pathogenic | 0.189 | Stabilizing | 0.272 | N | 0.506 | neutral | None | None | None | None | N |
S/F | 0.289 | likely_benign | 0.3144 | benign | -1.222 | Destabilizing | 0.667 | D | 0.758 | deleterious | N | 0.516513378 | None | None | N |
S/G | 0.1138 | likely_benign | 0.1187 | benign | -0.881 | Destabilizing | 0.001 | N | 0.2 | neutral | None | None | None | None | N |
S/H | 0.6155 | likely_pathogenic | 0.6135 | pathogenic | -1.416 | Destabilizing | 0.968 | D | 0.681 | prob.neutral | None | None | None | None | N |
S/I | 0.2545 | likely_benign | 0.3031 | benign | -0.433 | Destabilizing | 0.396 | N | 0.735 | prob.delet. | None | None | None | None | N |
S/K | 0.8536 | likely_pathogenic | 0.8581 | pathogenic | -0.442 | Destabilizing | 0.272 | N | 0.498 | neutral | None | None | None | None | N |
S/L | 0.1192 | likely_benign | 0.1308 | benign | -0.433 | Destabilizing | 0.157 | N | 0.641 | neutral | None | None | None | None | N |
S/M | 0.2213 | likely_benign | 0.2534 | benign | -0.019 | Destabilizing | 0.909 | D | 0.681 | prob.neutral | None | None | None | None | N |
S/N | 0.2777 | likely_benign | 0.2702 | benign | -0.229 | Destabilizing | 0.272 | N | 0.519 | neutral | None | None | None | None | N |
S/P | 0.8335 | likely_pathogenic | 0.8688 | pathogenic | -0.502 | Destabilizing | 0.667 | D | 0.696 | prob.neutral | D | 0.522843254 | None | None | N |
S/Q | 0.6796 | likely_pathogenic | 0.6844 | pathogenic | -0.484 | Destabilizing | 0.726 | D | 0.541 | neutral | None | None | None | None | N |
S/R | 0.7571 | likely_pathogenic | 0.7611 | pathogenic | -0.308 | Destabilizing | 0.567 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/T | 0.0936 | likely_benign | 0.1117 | benign | -0.386 | Destabilizing | None | N | 0.162 | neutral | N | 0.513377705 | None | None | N |
S/V | 0.2399 | likely_benign | 0.2954 | benign | -0.502 | Destabilizing | 0.157 | N | 0.639 | neutral | None | None | None | None | N |
S/W | 0.5572 | ambiguous | 0.5708 | pathogenic | -1.139 | Destabilizing | 0.968 | D | 0.791 | deleterious | None | None | None | None | N |
S/Y | 0.3331 | likely_benign | 0.3508 | ambiguous | -0.882 | Destabilizing | 0.667 | D | 0.755 | deleterious | N | 0.519475892 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.