Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7586 | 22981;22982;22983 | chr2:178721907;178721906;178721905 | chr2:179586634;179586633;179586632 |
N2AB | 7269 | 22030;22031;22032 | chr2:178721907;178721906;178721905 | chr2:179586634;179586633;179586632 |
N2A | 6342 | 19249;19250;19251 | chr2:178721907;178721906;178721905 | chr2:179586634;179586633;179586632 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.994 | N | 0.755 | 0.276 | 0.501685917333 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1065 | likely_benign | 0.1046 | benign | -0.736 | Destabilizing | 0.415 | N | 0.679 | prob.neutral | N | 0.473497335 | None | None | N |
T/C | 0.4855 | ambiguous | 0.4734 | ambiguous | -0.934 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/D | 0.5851 | likely_pathogenic | 0.593 | pathogenic | -2.089 | Highly Destabilizing | 0.95 | D | 0.747 | deleterious | None | None | None | None | N |
T/E | 0.4796 | ambiguous | 0.4755 | ambiguous | -1.938 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
T/F | 0.1644 | likely_benign | 0.1882 | benign | -0.809 | Destabilizing | 0.843 | D | 0.671 | neutral | None | None | None | None | N |
T/G | 0.3861 | ambiguous | 0.4072 | ambiguous | -1.078 | Destabilizing | 0.958 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/H | 0.234 | likely_benign | 0.245 | benign | -1.495 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/I | 0.0982 | likely_benign | 0.1146 | benign | 0.126 | Stabilizing | 0.994 | D | 0.755 | deleterious | N | 0.456696527 | None | None | N |
T/K | 0.2903 | likely_benign | 0.2784 | benign | -0.508 | Destabilizing | 0.997 | D | 0.747 | deleterious | None | None | None | None | N |
T/L | 0.0923 | likely_benign | 0.1074 | benign | 0.126 | Stabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
T/M | 0.0906 | likely_benign | 0.0917 | benign | 0.205 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/N | 0.1606 | likely_benign | 0.1788 | benign | -1.306 | Destabilizing | 0.805 | D | 0.7 | prob.neutral | N | 0.505782279 | None | None | N |
T/P | 0.8098 | likely_pathogenic | 0.835 | pathogenic | -0.13 | Destabilizing | 0.967 | D | 0.749 | deleterious | D | 0.524140024 | None | None | N |
T/Q | 0.265 | likely_benign | 0.2684 | benign | -1.215 | Destabilizing | 0.977 | D | 0.752 | deleterious | None | None | None | None | N |
T/R | 0.1881 | likely_benign | 0.184 | benign | -0.644 | Destabilizing | 0.938 | D | 0.57 | neutral | None | None | None | None | N |
T/S | 0.108 | likely_benign | 0.1167 | benign | -1.294 | Destabilizing | 0.018 | N | 0.314 | neutral | N | 0.496884447 | None | None | N |
T/V | 0.1017 | likely_benign | 0.1113 | benign | -0.13 | Destabilizing | 0.979 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/W | 0.5583 | ambiguous | 0.5677 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/Y | 0.2441 | likely_benign | 0.2516 | benign | -0.615 | Destabilizing | 0.997 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.