Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7601 | 23026;23027;23028 | chr2:178721862;178721861;178721860 | chr2:179586589;179586588;179586587 |
N2AB | 7284 | 22075;22076;22077 | chr2:178721862;178721861;178721860 | chr2:179586589;179586588;179586587 |
N2A | 6357 | 19294;19295;19296 | chr2:178721862;178721861;178721860 | chr2:179586589;179586588;179586587 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.619 | N | 0.566 | 0.362 | 0.434934176536 | gnomAD-4.0.0 | 6.86339E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01296E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1882 | likely_benign | 0.1758 | benign | -0.885 | Destabilizing | 0.594 | D | 0.383 | neutral | None | None | None | None | N |
Q/C | 0.6063 | likely_pathogenic | 0.596 | pathogenic | -0.24 | Destabilizing | 0.989 | D | 0.545 | neutral | None | None | None | None | N |
Q/D | 0.3114 | likely_benign | 0.2753 | benign | -0.459 | Destabilizing | 0.001 | N | 0.141 | neutral | None | None | None | None | N |
Q/E | 0.0844 | likely_benign | 0.0804 | benign | -0.384 | Destabilizing | None | N | 0.124 | neutral | N | 0.479510274 | None | None | N |
Q/F | 0.415 | ambiguous | 0.4084 | ambiguous | -0.893 | Destabilizing | 0.933 | D | 0.569 | neutral | None | None | None | None | N |
Q/G | 0.283 | likely_benign | 0.2785 | benign | -1.177 | Destabilizing | 0.748 | D | 0.512 | neutral | None | None | None | None | N |
Q/H | 0.1321 | likely_benign | 0.1269 | benign | -1.104 | Destabilizing | 0.883 | D | 0.539 | neutral | N | 0.483516158 | None | None | N |
Q/I | 0.2344 | likely_benign | 0.2215 | benign | -0.156 | Destabilizing | 0.414 | N | 0.543 | neutral | None | None | None | None | N |
Q/K | 0.0918 | likely_benign | 0.0938 | benign | -0.129 | Destabilizing | 0.18 | N | 0.434 | neutral | N | 0.443090901 | None | None | N |
Q/L | 0.0925 | likely_benign | 0.0913 | benign | -0.156 | Destabilizing | 0.18 | N | 0.482 | neutral | N | 0.498522896 | None | None | N |
Q/M | 0.27 | likely_benign | 0.2527 | benign | 0.407 | Stabilizing | 0.909 | D | 0.532 | neutral | None | None | None | None | N |
Q/N | 0.2253 | likely_benign | 0.196 | benign | -0.695 | Destabilizing | 0.515 | D | 0.428 | neutral | None | None | None | None | N |
Q/P | 0.1438 | likely_benign | 0.1492 | benign | -0.371 | Destabilizing | 0.619 | D | 0.566 | neutral | N | 0.483846359 | None | None | N |
Q/R | 0.0926 | likely_benign | 0.0984 | benign | -0.053 | Destabilizing | 0.411 | N | 0.423 | neutral | N | 0.454366687 | None | None | N |
Q/S | 0.1947 | likely_benign | 0.1821 | benign | -0.863 | Destabilizing | 0.594 | D | 0.427 | neutral | None | None | None | None | N |
Q/T | 0.1517 | likely_benign | 0.1398 | benign | -0.593 | Destabilizing | 0.054 | N | 0.463 | neutral | None | None | None | None | N |
Q/V | 0.159 | likely_benign | 0.1495 | benign | -0.371 | Destabilizing | 0.002 | N | 0.324 | neutral | None | None | None | None | N |
Q/W | 0.3184 | likely_benign | 0.3397 | benign | -0.699 | Destabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | N |
Q/Y | 0.2651 | likely_benign | 0.2559 | benign | -0.456 | Destabilizing | 0.977 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.