Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7619 | 23080;23081;23082 | chr2:178721164;178721163;178721162 | chr2:179585891;179585890;179585889 |
N2AB | 7302 | 22129;22130;22131 | chr2:178721164;178721163;178721162 | chr2:179585891;179585890;179585889 |
N2A | 6375 | 19348;19349;19350 | chr2:178721164;178721163;178721162 | chr2:179585891;179585890;179585889 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs770870073 | 0.103 | 0.007 | N | 0.193 | 0.137 | 0.176091768786 | gnomAD-2.1.1 | 8.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
V/L | rs770870073 | 0.103 | 0.007 | N | 0.193 | 0.137 | 0.176091768786 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs770870073 | 0.103 | 0.007 | N | 0.193 | 0.137 | 0.176091768786 | gnomAD-4.0.0 | 1.49484E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8739E-05 | 0 | 3.2231E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1634 | likely_benign | 0.1532 | benign | -0.6 | Destabilizing | 0.037 | N | 0.201 | neutral | D | 0.52769101 | None | None | N |
V/C | 0.7642 | likely_pathogenic | 0.7673 | pathogenic | -0.656 | Destabilizing | 0.859 | D | 0.299 | neutral | None | None | None | None | N |
V/D | 0.3265 | likely_benign | 0.29 | benign | -0.399 | Destabilizing | 0.301 | N | 0.418 | neutral | D | 0.532232825 | None | None | N |
V/E | 0.2402 | likely_benign | 0.2334 | benign | -0.504 | Destabilizing | 0.22 | N | 0.343 | neutral | None | None | None | None | N |
V/F | 0.1249 | likely_benign | 0.1247 | benign | -0.741 | Destabilizing | None | N | 0.141 | neutral | D | 0.530502029 | None | None | N |
V/G | 0.2504 | likely_benign | 0.2261 | benign | -0.759 | Destabilizing | 0.301 | N | 0.371 | neutral | D | 0.537966719 | None | None | N |
V/H | 0.5116 | ambiguous | 0.4868 | ambiguous | -0.308 | Destabilizing | 0.001 | N | 0.185 | neutral | None | None | None | None | N |
V/I | 0.0676 | likely_benign | 0.0686 | benign | -0.326 | Destabilizing | None | N | 0.103 | neutral | N | 0.498640326 | None | None | N |
V/K | 0.4021 | ambiguous | 0.3831 | ambiguous | -0.579 | Destabilizing | 0.004 | N | 0.188 | neutral | None | None | None | None | N |
V/L | 0.1505 | likely_benign | 0.1453 | benign | -0.326 | Destabilizing | 0.007 | N | 0.193 | neutral | N | 0.489308767 | None | None | N |
V/M | 0.1192 | likely_benign | 0.1226 | benign | -0.353 | Destabilizing | 0.025 | N | 0.2 | neutral | None | None | None | None | N |
V/N | 0.2537 | likely_benign | 0.2201 | benign | -0.296 | Destabilizing | 0.22 | N | 0.431 | neutral | None | None | None | None | N |
V/P | 0.5732 | likely_pathogenic | 0.5795 | pathogenic | -0.381 | Destabilizing | 0.001 | N | 0.215 | neutral | None | None | None | None | N |
V/Q | 0.3246 | likely_benign | 0.304 | benign | -0.542 | Destabilizing | 0.22 | N | 0.417 | neutral | None | None | None | None | N |
V/R | 0.3571 | ambiguous | 0.3319 | benign | -0.036 | Destabilizing | 0.124 | N | 0.448 | neutral | None | None | None | None | N |
V/S | 0.2078 | likely_benign | 0.1832 | benign | -0.676 | Destabilizing | 0.104 | N | 0.316 | neutral | None | None | None | None | N |
V/T | 0.1385 | likely_benign | 0.1326 | benign | -0.678 | Destabilizing | 0.104 | N | 0.207 | neutral | None | None | None | None | N |
V/W | 0.6563 | likely_pathogenic | 0.6802 | pathogenic | -0.824 | Destabilizing | 0.958 | D | 0.309 | neutral | None | None | None | None | N |
V/Y | 0.4186 | ambiguous | 0.4183 | ambiguous | -0.531 | Destabilizing | 0.124 | N | 0.352 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.