Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7636 | 23131;23132;23133 | chr2:178721113;178721112;178721111 | chr2:179585840;179585839;179585838 |
N2AB | 7319 | 22180;22181;22182 | chr2:178721113;178721112;178721111 | chr2:179585840;179585839;179585838 |
N2A | 6392 | 19399;19400;19401 | chr2:178721113;178721112;178721111 | chr2:179585840;179585839;179585838 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1220583171 | -0.024 | 0.883 | D | 0.561 | 0.548 | 0.449187354989 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/A | rs1220583171 | -0.024 | 0.883 | D | 0.561 | 0.548 | 0.449187354989 | gnomAD-4.0.0 | 3.18538E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72318E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3158 | likely_benign | 0.7026 | pathogenic | -0.297 | Destabilizing | 0.883 | D | 0.561 | neutral | D | 0.536109933 | None | None | I |
P/C | 0.9267 | likely_pathogenic | 0.9821 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/D | 0.8069 | likely_pathogenic | 0.9543 | pathogenic | -0.292 | Destabilizing | 0.944 | D | 0.647 | neutral | None | None | None | None | I |
P/E | 0.5783 | likely_pathogenic | 0.8825 | pathogenic | -0.413 | Destabilizing | 0.964 | D | 0.653 | neutral | None | None | None | None | I |
P/F | 0.9374 | likely_pathogenic | 0.9885 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/G | 0.7346 | likely_pathogenic | 0.9189 | pathogenic | -0.361 | Destabilizing | 0.98 | D | 0.626 | neutral | None | None | None | None | I |
P/H | 0.6427 | likely_pathogenic | 0.9107 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
P/I | 0.8244 | likely_pathogenic | 0.9401 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/K | 0.7545 | likely_pathogenic | 0.9453 | pathogenic | -0.354 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | I |
P/L | 0.4506 | ambiguous | 0.7949 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.671 | neutral | D | 0.612010596 | None | None | I |
P/M | 0.7555 | likely_pathogenic | 0.9312 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
P/N | 0.7896 | likely_pathogenic | 0.9498 | pathogenic | -0.135 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | I |
P/Q | 0.4689 | ambiguous | 0.8397 | pathogenic | -0.356 | Destabilizing | 0.998 | D | 0.645 | neutral | D | 0.526728637 | None | None | I |
P/R | 0.5758 | likely_pathogenic | 0.8812 | pathogenic | 0.095 | Stabilizing | 0.999 | D | 0.661 | neutral | D | 0.611606988 | None | None | I |
P/S | 0.4502 | ambiguous | 0.8429 | pathogenic | -0.444 | Destabilizing | 0.823 | D | 0.337 | neutral | D | 0.549098853 | None | None | I |
P/T | 0.3712 | ambiguous | 0.721 | pathogenic | -0.473 | Destabilizing | 0.976 | D | 0.665 | neutral | D | 0.611606988 | None | None | I |
P/V | 0.6649 | likely_pathogenic | 0.8738 | pathogenic | -0.252 | Destabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | I |
P/W | 0.9491 | likely_pathogenic | 0.9902 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/Y | 0.9189 | likely_pathogenic | 0.9845 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.