Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7639 | 23140;23141;23142 | chr2:178721104;178721103;178721102 | chr2:179585831;179585830;179585829 |
N2AB | 7322 | 22189;22190;22191 | chr2:178721104;178721103;178721102 | chr2:179585831;179585830;179585829 |
N2A | 6395 | 19408;19409;19410 | chr2:178721104;178721103;178721102 | chr2:179585831;179585830;179585829 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs1413635050 | 0.756 | 0.3 | N | 0.623 | 0.249 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/I | rs1413635050 | 0.756 | 0.3 | N | 0.623 | 0.249 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/I | rs1413635050 | 0.756 | 0.3 | N | 0.623 | 0.249 | None | gnomAD-4.0.0 | 1.05378E-05 | None | None | None | None | I | None | 1.33486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.27181E-05 | 0 | 1.60195E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2183 | likely_benign | 0.2778 | benign | -0.173 | Destabilizing | 0.73 | D | 0.525 | neutral | None | None | None | None | I |
K/C | 0.6228 | likely_pathogenic | 0.6805 | pathogenic | -0.182 | Destabilizing | 0.996 | D | 0.629 | neutral | None | None | None | None | I |
K/D | 0.3838 | ambiguous | 0.4837 | ambiguous | 0.009 | Stabilizing | 0.004 | N | 0.235 | neutral | None | None | None | None | I |
K/E | 0.1094 | likely_benign | 0.1404 | benign | 0.078 | Stabilizing | 0.113 | N | 0.495 | neutral | N | 0.480089064 | None | None | I |
K/F | 0.6078 | likely_pathogenic | 0.7097 | pathogenic | 0.015 | Stabilizing | 0.959 | D | 0.619 | neutral | None | None | None | None | I |
K/G | 0.3582 | ambiguous | 0.4336 | ambiguous | -0.484 | Destabilizing | 0.73 | D | 0.557 | neutral | None | None | None | None | I |
K/H | 0.1884 | likely_benign | 0.2277 | benign | -0.814 | Destabilizing | 0.889 | D | 0.566 | neutral | None | None | None | None | I |
K/I | 0.2277 | likely_benign | 0.2903 | benign | 0.602 | Stabilizing | 0.3 | N | 0.623 | neutral | N | 0.492733074 | None | None | I |
K/L | 0.2537 | likely_benign | 0.3205 | benign | 0.602 | Stabilizing | 0.074 | N | 0.585 | neutral | None | None | None | None | I |
K/M | 0.1626 | likely_benign | 0.1992 | benign | 0.309 | Stabilizing | 0.964 | D | 0.541 | neutral | None | None | None | None | I |
K/N | 0.2503 | likely_benign | 0.318 | benign | -0.012 | Destabilizing | 0.672 | D | 0.467 | neutral | N | 0.47345388 | None | None | I |
K/P | 0.8001 | likely_pathogenic | 0.8617 | pathogenic | 0.374 | Stabilizing | 0.983 | D | 0.569 | neutral | None | None | None | None | I |
K/Q | 0.0894 | likely_benign | 0.1017 | benign | -0.087 | Destabilizing | 0.198 | N | 0.509 | neutral | N | 0.490460773 | None | None | I |
K/R | 0.0751 | likely_benign | 0.0772 | benign | -0.358 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.455502838 | None | None | I |
K/S | 0.2323 | likely_benign | 0.3009 | benign | -0.518 | Destabilizing | 0.73 | D | 0.469 | neutral | None | None | None | None | I |
K/T | 0.0928 | likely_benign | 0.1165 | benign | -0.269 | Destabilizing | 0.555 | D | 0.538 | neutral | N | 0.453193251 | None | None | I |
K/V | 0.2127 | likely_benign | 0.266 | benign | 0.374 | Stabilizing | 0.427 | N | 0.599 | neutral | None | None | None | None | I |
K/W | 0.582 | likely_pathogenic | 0.6851 | pathogenic | 0.046 | Stabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | I |
K/Y | 0.4951 | ambiguous | 0.5905 | pathogenic | 0.337 | Stabilizing | 0.732 | D | 0.632 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.