Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7640 | 23143;23144;23145 | chr2:178721101;178721100;178721099 | chr2:179585828;179585827;179585826 |
N2AB | 7323 | 22192;22193;22194 | chr2:178721101;178721100;178721099 | chr2:179585828;179585827;179585826 |
N2A | 6396 | 19411;19412;19413 | chr2:178721101;178721100;178721099 | chr2:179585828;179585827;179585826 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1245374725 | None | 0.001 | N | 0.232 | 0.186 | 0.416454006429 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/L | rs1245374725 | -0.189 | 0.12 | D | 0.514 | 0.418 | 0.457013227636 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5021 | ambiguous | 0.4836 | ambiguous | -1.808 | Destabilizing | 0.637 | D | 0.683 | prob.neutral | D | 0.589408467 | None | None | N |
V/C | 0.9489 | likely_pathogenic | 0.9405 | pathogenic | -1.076 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/D | 0.9652 | likely_pathogenic | 0.9716 | pathogenic | -2.258 | Highly Destabilizing | 0.987 | D | 0.851 | deleterious | D | 0.61943807 | None | None | N |
V/E | 0.9301 | likely_pathogenic | 0.9475 | pathogenic | -2.082 | Highly Destabilizing | 0.941 | D | 0.818 | deleterious | None | None | None | None | N |
V/F | 0.5051 | ambiguous | 0.5375 | ambiguous | -1.123 | Destabilizing | 0.965 | D | 0.753 | deleterious | D | 0.540219922 | None | None | N |
V/G | 0.6866 | likely_pathogenic | 0.6699 | pathogenic | -2.291 | Highly Destabilizing | 0.99 | D | 0.823 | deleterious | D | 0.635457431 | None | None | N |
V/H | 0.976 | likely_pathogenic | 0.9811 | pathogenic | -2.007 | Highly Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
V/I | 0.1003 | likely_benign | 0.1097 | benign | -0.483 | Destabilizing | 0.001 | N | 0.232 | neutral | N | 0.467765633 | None | None | N |
V/K | 0.9529 | likely_pathogenic | 0.9649 | pathogenic | -1.487 | Destabilizing | 0.945 | D | 0.824 | deleterious | None | None | None | None | N |
V/L | 0.4958 | ambiguous | 0.5555 | ambiguous | -0.483 | Destabilizing | 0.12 | N | 0.514 | neutral | D | 0.543914914 | None | None | N |
V/M | 0.4352 | ambiguous | 0.4528 | ambiguous | -0.341 | Destabilizing | 0.963 | D | 0.641 | neutral | None | None | None | None | N |
V/N | 0.9165 | likely_pathogenic | 0.9277 | pathogenic | -1.638 | Destabilizing | 0.838 | D | 0.856 | deleterious | None | None | None | None | N |
V/P | 0.8796 | likely_pathogenic | 0.9207 | pathogenic | -0.896 | Destabilizing | 0.94 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9404 | likely_pathogenic | 0.9526 | pathogenic | -1.563 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.9376 | likely_pathogenic | 0.9515 | pathogenic | -1.264 | Destabilizing | 0.987 | D | 0.851 | deleterious | None | None | None | None | N |
V/S | 0.7884 | likely_pathogenic | 0.7762 | pathogenic | -2.201 | Highly Destabilizing | 0.738 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.5452 | ambiguous | 0.5258 | ambiguous | -1.89 | Destabilizing | 0.03 | N | 0.389 | neutral | None | None | None | None | N |
V/W | 0.9779 | likely_pathogenic | 0.9824 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/Y | 0.9032 | likely_pathogenic | 0.9186 | pathogenic | -1.193 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.