Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7651 | 23176;23177;23178 | chr2:178721068;178721067;178721066 | chr2:179585795;179585794;179585793 |
N2AB | 7334 | 22225;22226;22227 | chr2:178721068;178721067;178721066 | chr2:179585795;179585794;179585793 |
N2A | 6407 | 19444;19445;19446 | chr2:178721068;178721067;178721066 | chr2:179585795;179585794;179585793 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1461872954 | -0.791 | 0.248 | N | 0.241 | 0.22 | 0.402614778071 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1461872954 | -0.791 | 0.248 | N | 0.241 | 0.22 | 0.402614778071 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1461872954 | -0.791 | 0.248 | N | 0.241 | 0.22 | 0.402614778071 | gnomAD-4.0.0 | 5.57904E-06 | None | None | None | None | N | None | 1.06803E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47909E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1005 | likely_benign | 0.1101 | benign | -0.323 | Destabilizing | None | N | 0.125 | neutral | N | 0.434396847 | None | None | N |
E/C | 0.7826 | likely_pathogenic | 0.8355 | pathogenic | 0.106 | Stabilizing | 0.945 | D | 0.303 | neutral | None | None | None | None | N |
E/D | 0.1169 | likely_benign | 0.1173 | benign | -0.276 | Destabilizing | 0.049 | N | 0.18 | neutral | N | 0.428895026 | None | None | N |
E/F | 0.6945 | likely_pathogenic | 0.7805 | pathogenic | -0.341 | Destabilizing | 0.893 | D | 0.359 | neutral | None | None | None | None | N |
E/G | 0.1103 | likely_benign | 0.1272 | benign | -0.504 | Destabilizing | 0.248 | N | 0.241 | neutral | N | 0.46254624 | None | None | N |
E/H | 0.3175 | likely_benign | 0.3842 | ambiguous | -0.178 | Destabilizing | 0.003 | N | 0.147 | neutral | None | None | None | None | N |
E/I | 0.3604 | ambiguous | 0.4338 | ambiguous | 0.112 | Stabilizing | 0.355 | N | 0.377 | neutral | None | None | None | None | N |
E/K | 0.09 | likely_benign | 0.1111 | benign | 0.365 | Stabilizing | 0.268 | N | 0.155 | neutral | N | 0.494463871 | None | None | N |
E/L | 0.3607 | ambiguous | 0.4333 | ambiguous | 0.112 | Stabilizing | 0.185 | N | 0.317 | neutral | None | None | None | None | N |
E/M | 0.4322 | ambiguous | 0.4936 | ambiguous | 0.271 | Stabilizing | 0.681 | D | 0.309 | neutral | None | None | None | None | N |
E/N | 0.1986 | likely_benign | 0.2207 | benign | 0.155 | Stabilizing | 0.204 | N | 0.14 | neutral | None | None | None | None | N |
E/P | 0.2086 | likely_benign | 0.2559 | benign | -0.013 | Destabilizing | None | N | 0.129 | neutral | None | None | None | None | N |
E/Q | 0.0991 | likely_benign | 0.1088 | benign | 0.178 | Stabilizing | 0.563 | D | 0.177 | neutral | N | 0.483689516 | None | None | N |
E/R | 0.1519 | likely_benign | 0.1934 | benign | 0.486 | Stabilizing | 0.54 | D | 0.143 | neutral | None | None | None | None | N |
E/S | 0.1361 | likely_benign | 0.1525 | benign | -0.013 | Destabilizing | 0.116 | N | 0.172 | neutral | None | None | None | None | N |
E/T | 0.176 | likely_benign | 0.2042 | benign | 0.132 | Stabilizing | 0.266 | N | 0.263 | neutral | None | None | None | None | N |
E/V | 0.2071 | likely_benign | 0.2471 | benign | -0.013 | Destabilizing | 0.057 | N | 0.265 | neutral | N | 0.489039408 | None | None | N |
E/W | 0.8322 | likely_pathogenic | 0.8998 | pathogenic | -0.243 | Destabilizing | 0.996 | D | 0.317 | neutral | None | None | None | None | N |
E/Y | 0.4884 | ambiguous | 0.6003 | pathogenic | -0.11 | Destabilizing | 0.917 | D | 0.395 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.