Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7655 | 23188;23189;23190 | chr2:178721056;178721055;178721054 | chr2:179585783;179585782;179585781 |
N2AB | 7338 | 22237;22238;22239 | chr2:178721056;178721055;178721054 | chr2:179585783;179585782;179585781 |
N2A | 6411 | 19456;19457;19458 | chr2:178721056;178721055;178721054 | chr2:179585783;179585782;179585781 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs775036090 | -1.06 | 0.801 | N | 0.51 | 0.206 | 0.505765104075 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/F | rs775036090 | -1.06 | 0.801 | N | 0.51 | 0.206 | 0.505765104075 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86118E-06 | 0 | 0 |
Y/N | None | None | 0.934 | N | 0.559 | 0.553 | 0.701728203507 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.792 | likely_pathogenic | 0.8559 | pathogenic | -3.049 | Highly Destabilizing | 0.842 | D | 0.505 | neutral | None | None | None | None | N |
Y/C | 0.2819 | likely_benign | 0.3263 | benign | -2.133 | Highly Destabilizing | 0.997 | D | 0.562 | neutral | N | 0.499952832 | None | None | N |
Y/D | 0.7242 | likely_pathogenic | 0.8409 | pathogenic | -3.332 | Highly Destabilizing | 0.966 | D | 0.623 | neutral | N | 0.514778631 | None | None | N |
Y/E | 0.8625 | likely_pathogenic | 0.9227 | pathogenic | -3.148 | Highly Destabilizing | 0.949 | D | 0.55 | neutral | None | None | None | None | N |
Y/F | 0.1452 | likely_benign | 0.1693 | benign | -1.152 | Destabilizing | 0.801 | D | 0.51 | neutral | N | 0.48828726 | None | None | N |
Y/G | 0.7243 | likely_pathogenic | 0.7999 | pathogenic | -3.472 | Highly Destabilizing | 0.974 | D | 0.586 | neutral | None | None | None | None | N |
Y/H | 0.3703 | ambiguous | 0.4736 | ambiguous | -2.12 | Highly Destabilizing | 0.028 | N | 0.375 | neutral | N | 0.495426663 | None | None | N |
Y/I | 0.5598 | ambiguous | 0.6356 | pathogenic | -1.662 | Destabilizing | 0.728 | D | 0.481 | neutral | None | None | None | None | N |
Y/K | 0.8485 | likely_pathogenic | 0.909 | pathogenic | -2.256 | Highly Destabilizing | 0.974 | D | 0.552 | neutral | None | None | None | None | N |
Y/L | 0.5513 | ambiguous | 0.6112 | pathogenic | -1.662 | Destabilizing | 0.016 | N | 0.321 | neutral | None | None | None | None | N |
Y/M | 0.7025 | likely_pathogenic | 0.7683 | pathogenic | -1.502 | Destabilizing | 0.949 | D | 0.562 | neutral | None | None | None | None | N |
Y/N | 0.3706 | ambiguous | 0.4935 | ambiguous | -2.999 | Highly Destabilizing | 0.934 | D | 0.559 | neutral | N | 0.508929281 | None | None | N |
Y/P | 0.9817 | likely_pathogenic | 0.9873 | pathogenic | -2.137 | Highly Destabilizing | 0.991 | D | 0.646 | neutral | None | None | None | None | N |
Y/Q | 0.7719 | likely_pathogenic | 0.8655 | pathogenic | -2.771 | Highly Destabilizing | 0.974 | D | 0.577 | neutral | None | None | None | None | N |
Y/R | 0.7377 | likely_pathogenic | 0.8313 | pathogenic | -1.948 | Destabilizing | 0.974 | D | 0.581 | neutral | None | None | None | None | N |
Y/S | 0.5703 | likely_pathogenic | 0.696 | pathogenic | -3.392 | Highly Destabilizing | 0.966 | D | 0.545 | neutral | N | 0.496812507 | None | None | N |
Y/T | 0.6625 | likely_pathogenic | 0.769 | pathogenic | -3.083 | Highly Destabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | N |
Y/V | 0.4477 | ambiguous | 0.5197 | ambiguous | -2.137 | Highly Destabilizing | 0.067 | N | 0.351 | neutral | None | None | None | None | N |
Y/W | 0.5504 | ambiguous | 0.606 | pathogenic | -0.594 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.