Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7656 | 23191;23192;23193 | chr2:178721053;178721052;178721051 | chr2:179585780;179585779;179585778 |
N2AB | 7339 | 22240;22241;22242 | chr2:178721053;178721052;178721051 | chr2:179585780;179585779;179585778 |
N2A | 6412 | 19459;19460;19461 | chr2:178721053;178721052;178721051 | chr2:179585780;179585779;179585778 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs184123332 | -0.716 | 0.116 | N | 0.235 | 0.193 | None | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.66963E-04 | None | 6.54E-05 | None | 0 | 0 | 0 |
N/D | rs184123332 | -0.716 | 0.116 | N | 0.235 | 0.193 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 7.71903E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs184123332 | -0.716 | 0.116 | N | 0.235 | 0.193 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
N/D | rs184123332 | -0.716 | 0.116 | N | 0.235 | 0.193 | None | gnomAD-4.0.0 | 8.73922E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.09839E-03 | None | 0 | 0 | 0 | 2.19679E-05 | 0 |
N/K | None | None | 0.001 | N | 0.08 | 0.168 | 0.17948927462 | gnomAD-4.0.0 | 6.84423E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65733E-05 |
N/S | rs1197475799 | -0.097 | 0.002 | N | 0.1 | 0.092 | 0.165133752707 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs1197475799 | -0.097 | 0.002 | N | 0.1 | 0.092 | 0.165133752707 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43357E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1394 | likely_benign | 0.1515 | benign | -0.417 | Destabilizing | 0.036 | N | 0.272 | neutral | None | None | None | None | I |
N/C | 0.244 | likely_benign | 0.2346 | benign | 0.035 | Stabilizing | 0.901 | D | 0.361 | neutral | None | None | None | None | I |
N/D | 0.0989 | likely_benign | 0.1088 | benign | -1.447 | Destabilizing | 0.116 | N | 0.235 | neutral | N | 0.45738835 | None | None | I |
N/E | 0.1819 | likely_benign | 0.2232 | benign | -1.388 | Destabilizing | 0.036 | N | 0.204 | neutral | None | None | None | None | I |
N/F | 0.377 | ambiguous | 0.4317 | ambiguous | -0.624 | Destabilizing | 0.296 | N | 0.437 | neutral | None | None | None | None | I |
N/G | 0.1899 | likely_benign | 0.2113 | benign | -0.685 | Destabilizing | 0.08 | N | 0.259 | neutral | None | None | None | None | I |
N/H | 0.0572 | likely_benign | 0.0594 | benign | -0.697 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.440400099 | None | None | I |
N/I | 0.1607 | likely_benign | 0.1674 | benign | 0.231 | Stabilizing | 0.001 | N | 0.304 | neutral | N | 0.441650893 | None | None | I |
N/K | 0.0996 | likely_benign | 0.1236 | benign | -0.047 | Destabilizing | 0.001 | N | 0.08 | neutral | N | 0.351970251 | None | None | I |
N/L | 0.181 | likely_benign | 0.1882 | benign | 0.231 | Stabilizing | 0.001 | N | 0.261 | neutral | None | None | None | None | I |
N/M | 0.249 | likely_benign | 0.2656 | benign | 0.83 | Stabilizing | 0.596 | D | 0.377 | neutral | None | None | None | None | I |
N/P | 0.7096 | likely_pathogenic | 0.798 | pathogenic | 0.044 | Stabilizing | 0.46 | N | 0.394 | neutral | None | None | None | None | I |
N/Q | 0.127 | likely_benign | 0.1512 | benign | -0.997 | Destabilizing | 0.007 | N | 0.079 | neutral | None | None | None | None | I |
N/R | 0.0962 | likely_benign | 0.1249 | benign | 0.082 | Stabilizing | 0.08 | N | 0.188 | neutral | None | None | None | None | I |
N/S | 0.0635 | likely_benign | 0.0669 | benign | -0.631 | Destabilizing | 0.002 | N | 0.1 | neutral | N | 0.41900332 | None | None | I |
N/T | 0.0895 | likely_benign | 0.0915 | benign | -0.419 | Destabilizing | 0.061 | N | 0.225 | neutral | N | 0.395262455 | None | None | I |
N/V | 0.1667 | likely_benign | 0.1707 | benign | 0.044 | Stabilizing | 0.08 | N | 0.335 | neutral | None | None | None | None | I |
N/W | 0.5295 | ambiguous | 0.6294 | pathogenic | -0.535 | Destabilizing | 0.972 | D | 0.38 | neutral | None | None | None | None | I |
N/Y | 0.1212 | likely_benign | 0.1365 | benign | -0.178 | Destabilizing | 0.241 | N | 0.436 | neutral | N | 0.475128748 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.