Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7665 | 23218;23219;23220 | chr2:178721026;178721025;178721024 | chr2:179585753;179585752;179585751 |
N2AB | 7348 | 22267;22268;22269 | chr2:178721026;178721025;178721024 | chr2:179585753;179585752;179585751 |
N2A | 6421 | 19486;19487;19488 | chr2:178721026;178721025;178721024 | chr2:179585753;179585752;179585751 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.055 | N | 0.449 | 0.118 | 0.418095516054 | gnomAD-4.0.0 | 1.59249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43353E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1536 | likely_benign | 0.142 | benign | -2.308 | Highly Destabilizing | 0.007 | N | 0.341 | neutral | None | None | None | None | N |
L/C | 0.356 | ambiguous | 0.3342 | benign | -1.667 | Destabilizing | 0.356 | N | 0.527 | neutral | None | None | None | None | N |
L/D | 0.5467 | ambiguous | 0.5494 | ambiguous | -2.123 | Highly Destabilizing | 0.072 | N | 0.551 | neutral | None | None | None | None | N |
L/E | 0.2261 | likely_benign | 0.232 | benign | -1.991 | Destabilizing | 0.016 | N | 0.435 | neutral | None | None | None | None | N |
L/F | 0.0825 | likely_benign | 0.0838 | benign | -1.481 | Destabilizing | 0.055 | N | 0.449 | neutral | N | 0.49126885 | None | None | N |
L/G | 0.4147 | ambiguous | 0.4099 | ambiguous | -2.774 | Highly Destabilizing | 0.016 | N | 0.433 | neutral | None | None | None | None | N |
L/H | 0.1091 | likely_benign | 0.105 | benign | -2.058 | Highly Destabilizing | 0.214 | N | 0.572 | neutral | None | None | None | None | N |
L/I | 0.0624 | likely_benign | 0.062 | benign | -1.012 | Destabilizing | 0.006 | N | 0.328 | neutral | None | None | None | None | N |
L/K | 0.1389 | likely_benign | 0.1526 | benign | -1.578 | Destabilizing | 0.016 | N | 0.422 | neutral | None | None | None | None | N |
L/M | 0.0817 | likely_benign | 0.0785 | benign | -0.936 | Destabilizing | 0.005 | N | 0.301 | neutral | N | 0.485689672 | None | None | N |
L/N | 0.227 | likely_benign | 0.2348 | benign | -1.654 | Destabilizing | 0.038 | N | 0.556 | neutral | None | None | None | None | N |
L/P | 0.945 | likely_pathogenic | 0.9413 | pathogenic | -1.419 | Destabilizing | 0.136 | N | 0.592 | neutral | None | None | None | None | N |
L/Q | 0.0832 | likely_benign | 0.0829 | benign | -1.68 | Destabilizing | 0.001 | N | 0.421 | neutral | None | None | None | None | N |
L/R | 0.0973 | likely_benign | 0.1034 | benign | -1.146 | Destabilizing | None | N | 0.349 | neutral | None | None | None | None | N |
L/S | 0.1287 | likely_benign | 0.1259 | benign | -2.398 | Highly Destabilizing | None | N | 0.343 | neutral | N | 0.376441834 | None | None | N |
L/T | 0.1024 | likely_benign | 0.0991 | benign | -2.13 | Highly Destabilizing | None | N | 0.249 | neutral | None | None | None | None | N |
L/V | 0.0579 | likely_benign | 0.0559 | benign | -1.419 | Destabilizing | None | N | 0.119 | neutral | N | 0.390085922 | None | None | N |
L/W | 0.1651 | likely_benign | 0.1776 | benign | -1.71 | Destabilizing | 0.828 | D | 0.579 | neutral | D | 0.529133805 | None | None | N |
L/Y | 0.2046 | likely_benign | 0.2086 | benign | -1.453 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.