Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7676 | 23251;23252;23253 | chr2:178720993;178720992;178720991 | chr2:179585720;179585719;179585718 |
N2AB | 7359 | 22300;22301;22302 | chr2:178720993;178720992;178720991 | chr2:179585720;179585719;179585718 |
N2A | 6432 | 19519;19520;19521 | chr2:178720993;178720992;178720991 | chr2:179585720;179585719;179585718 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs199907920 | -0.284 | 0.86 | N | 0.561 | 0.332 | 0.15556083564 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.57E-05 | 0 |
S/R | rs199907920 | -0.284 | 0.86 | N | 0.561 | 0.332 | 0.15556083564 | gnomAD-4.0.0 | 4.79697E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.4058E-06 | 0 | 1.65931E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0963 | likely_benign | 0.0992 | benign | -0.993 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
S/C | 0.2109 | likely_benign | 0.215 | benign | -0.681 | Destabilizing | 0.832 | D | 0.559 | neutral | D | 0.538821141 | None | None | N |
S/D | 0.5627 | ambiguous | 0.5614 | ambiguous | -0.229 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | N |
S/E | 0.6594 | likely_pathogenic | 0.6592 | pathogenic | -0.243 | Destabilizing | 0.146 | N | 0.439 | neutral | None | None | None | None | N |
S/F | 0.505 | ambiguous | 0.4774 | ambiguous | -1.357 | Destabilizing | 0.867 | D | 0.673 | neutral | None | None | None | None | N |
S/G | 0.1104 | likely_benign | 0.1062 | benign | -1.199 | Destabilizing | 0.066 | N | 0.453 | neutral | N | 0.496572244 | None | None | N |
S/H | 0.5981 | likely_pathogenic | 0.5957 | pathogenic | -1.642 | Destabilizing | 0.987 | D | 0.56 | neutral | None | None | None | None | N |
S/I | 0.3743 | ambiguous | 0.3276 | benign | -0.546 | Destabilizing | 0.548 | D | 0.636 | neutral | D | 0.524324511 | None | None | N |
S/K | 0.7848 | likely_pathogenic | 0.7894 | pathogenic | -0.633 | Destabilizing | 0.478 | N | 0.434 | neutral | None | None | None | None | N |
S/L | 0.1964 | likely_benign | 0.1798 | benign | -0.546 | Destabilizing | 0.314 | N | 0.585 | neutral | None | None | None | None | N |
S/M | 0.292 | likely_benign | 0.2885 | benign | -0.13 | Destabilizing | 0.961 | D | 0.557 | neutral | None | None | None | None | N |
S/N | 0.236 | likely_benign | 0.2224 | benign | -0.596 | Destabilizing | 0.021 | N | 0.459 | neutral | N | 0.493849992 | None | None | N |
S/P | 0.8421 | likely_pathogenic | 0.8207 | pathogenic | -0.665 | Destabilizing | 0.635 | D | 0.537 | neutral | None | None | None | None | N |
S/Q | 0.6427 | likely_pathogenic | 0.6616 | pathogenic | -0.825 | Destabilizing | 0.867 | D | 0.449 | neutral | None | None | None | None | N |
S/R | 0.6628 | likely_pathogenic | 0.6759 | pathogenic | -0.479 | Destabilizing | 0.86 | D | 0.561 | neutral | N | 0.507839644 | None | None | N |
S/T | 0.0932 | likely_benign | 0.0883 | benign | -0.701 | Destabilizing | None | N | 0.318 | neutral | N | 0.494165934 | None | None | N |
S/V | 0.3627 | ambiguous | 0.3302 | benign | -0.665 | Destabilizing | 0.146 | N | 0.577 | neutral | None | None | None | None | N |
S/W | 0.6687 | likely_pathogenic | 0.6659 | pathogenic | -1.25 | Destabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/Y | 0.4768 | ambiguous | 0.4603 | ambiguous | -0.999 | Destabilizing | 0.867 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.