Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7682 | 23269;23270;23271 | chr2:178720975;178720974;178720973 | chr2:179585702;179585701;179585700 |
N2AB | 7365 | 22318;22319;22320 | chr2:178720975;178720974;178720973 | chr2:179585702;179585701;179585700 |
N2A | 6438 | 19537;19538;19539 | chr2:178720975;178720974;178720973 | chr2:179585702;179585701;179585700 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs761584703 | -0.891 | 0.999 | N | 0.669 | 0.367 | None | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.46E-05 | 0 |
E/K | rs761584703 | -0.891 | 0.999 | N | 0.669 | 0.367 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs761584703 | -0.891 | 0.999 | N | 0.669 | 0.367 | None | gnomAD-4.0.0 | 3.1094E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56421E-05 | 1.64962E-04 | 3.99964E-05 | 0 | 1.60689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2759 | likely_benign | 0.4269 | ambiguous | -1.01 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | N | 0.492872033 | None | None | N |
E/C | 0.9391 | likely_pathogenic | 0.9681 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/D | 0.4829 | ambiguous | 0.6632 | pathogenic | -1.395 | Destabilizing | 0.981 | D | 0.589 | neutral | N | 0.513382598 | None | None | N |
E/F | 0.8463 | likely_pathogenic | 0.9343 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
E/G | 0.473 | ambiguous | 0.6798 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.531993832 | None | None | N |
E/H | 0.5576 | ambiguous | 0.777 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/I | 0.3854 | ambiguous | 0.5512 | ambiguous | 0.091 | Stabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
E/K | 0.125 | likely_benign | 0.2827 | benign | -0.959 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.457116204 | None | None | N |
E/L | 0.5099 | ambiguous | 0.6925 | pathogenic | 0.091 | Stabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
E/M | 0.5044 | ambiguous | 0.6712 | pathogenic | 0.715 | Stabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
E/N | 0.5503 | ambiguous | 0.7787 | pathogenic | -1.371 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
E/P | 0.9952 | likely_pathogenic | 0.9979 | pathogenic | -0.256 | Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
E/Q | 0.1392 | likely_benign | 0.2338 | benign | -1.184 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.502715207 | None | None | N |
E/R | 0.2475 | likely_benign | 0.4838 | ambiguous | -0.828 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
E/S | 0.3918 | ambiguous | 0.5969 | pathogenic | -1.811 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/T | 0.3441 | ambiguous | 0.559 | ambiguous | -1.462 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/V | 0.2245 | likely_benign | 0.3229 | benign | -0.256 | Destabilizing | 0.999 | D | 0.866 | deleterious | N | 0.445592488 | None | None | N |
E/W | 0.9558 | likely_pathogenic | 0.9857 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/Y | 0.7802 | likely_pathogenic | 0.911 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.