Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7704 | 23335;23336;23337 | chr2:178720652;178720651;178720650 | chr2:179585379;179585378;179585377 |
N2AB | 7387 | 22384;22385;22386 | chr2:178720652;178720651;178720650 | chr2:179585379;179585378;179585377 |
N2A | 6460 | 19603;19604;19605 | chr2:178720652;178720651;178720650 | chr2:179585379;179585378;179585377 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs2078208221 | None | 0.06 | N | 0.335 | 0.476 | 0.390531646278 | gnomAD-4.0.0 | 1.6605E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.55284E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9959 | likely_pathogenic | 0.9929 | pathogenic | -3.021 | Highly Destabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
F/C | 0.9834 | likely_pathogenic | 0.9657 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.571189126 | None | None | N |
F/D | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
F/E | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -3.003 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
F/G | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -3.365 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
F/H | 0.995 | likely_pathogenic | 0.9926 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
F/I | 0.8357 | likely_pathogenic | 0.7229 | pathogenic | -1.927 | Destabilizing | 0.96 | D | 0.683 | prob.neutral | N | 0.491799304 | None | None | N |
F/K | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -1.784 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
F/L | 0.9896 | likely_pathogenic | 0.981 | pathogenic | -1.927 | Destabilizing | 0.06 | N | 0.335 | neutral | N | 0.504351059 | None | None | N |
F/M | 0.9568 | likely_pathogenic | 0.929 | pathogenic | -1.726 | Destabilizing | 0.954 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/N | 0.9975 | likely_pathogenic | 0.9962 | pathogenic | -1.936 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
F/P | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -2.295 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
F/Q | 0.9987 | likely_pathogenic | 0.998 | pathogenic | -2.141 | Highly Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
F/R | 0.9978 | likely_pathogenic | 0.9967 | pathogenic | -0.964 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
F/S | 0.9964 | likely_pathogenic | 0.9939 | pathogenic | -2.61 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.570682147 | None | None | N |
F/T | 0.9967 | likely_pathogenic | 0.9941 | pathogenic | -2.419 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
F/V | 0.8976 | likely_pathogenic | 0.8218 | pathogenic | -2.295 | Highly Destabilizing | 0.946 | D | 0.717 | prob.delet. | N | 0.518238579 | None | None | N |
F/W | 0.9604 | likely_pathogenic | 0.9451 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/Y | 0.8262 | likely_pathogenic | 0.7921 | pathogenic | -1.088 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | D | 0.534727127 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.