Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7706 | 23341;23342;23343 | chr2:178720646;178720645;178720644 | chr2:179585373;179585372;179585371 |
N2AB | 7389 | 22390;22391;22392 | chr2:178720646;178720645;178720644 | chr2:179585373;179585372;179585371 |
N2A | 6462 | 19609;19610;19611 | chr2:178720646;178720645;178720644 | chr2:179585373;179585372;179585371 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.001 | N | 0.083 | 0.136 | 0.178374595973 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2009 | likely_benign | 0.2037 | benign | -0.395 | Destabilizing | 0.3 | N | 0.232 | neutral | None | None | None | None | N |
Q/C | 0.5175 | ambiguous | 0.4919 | ambiguous | 0.21 | Stabilizing | 0.995 | D | 0.325 | neutral | None | None | None | None | N |
Q/D | 0.3776 | ambiguous | 0.3638 | ambiguous | -0.199 | Destabilizing | 0.495 | N | 0.163 | neutral | None | None | None | None | N |
Q/E | 0.0889 | likely_benign | 0.085 | benign | -0.182 | Destabilizing | 0.139 | N | 0.117 | neutral | N | 0.457159063 | None | None | N |
Q/F | 0.607 | likely_pathogenic | 0.5969 | pathogenic | -0.313 | Destabilizing | 0.981 | D | 0.373 | neutral | None | None | None | None | N |
Q/G | 0.2102 | likely_benign | 0.212 | benign | -0.669 | Destabilizing | 0.495 | N | 0.339 | neutral | None | None | None | None | N |
Q/H | 0.1644 | likely_benign | 0.1562 | benign | -0.569 | Destabilizing | 0.975 | D | 0.221 | neutral | N | 0.520498466 | None | None | N |
Q/I | 0.3345 | likely_benign | 0.3157 | benign | 0.263 | Stabilizing | 0.944 | D | 0.448 | neutral | None | None | None | None | N |
Q/K | 0.0671 | likely_benign | 0.0653 | benign | -0.182 | Destabilizing | 0.001 | N | 0.079 | neutral | N | 0.400342988 | None | None | N |
Q/L | 0.1348 | likely_benign | 0.1323 | benign | 0.263 | Stabilizing | 0.425 | N | 0.339 | neutral | N | 0.490348917 | None | None | N |
Q/M | 0.343 | ambiguous | 0.3385 | benign | 0.634 | Stabilizing | 0.981 | D | 0.23 | neutral | None | None | None | None | N |
Q/N | 0.2759 | likely_benign | 0.2661 | benign | -0.486 | Destabilizing | 0.495 | N | 0.162 | neutral | None | None | None | None | N |
Q/P | 0.4428 | ambiguous | 0.4781 | ambiguous | 0.074 | Stabilizing | 0.784 | D | 0.347 | neutral | N | 0.508377317 | None | None | N |
Q/R | 0.0727 | likely_benign | 0.0725 | benign | -0.032 | Destabilizing | 0.001 | N | 0.083 | neutral | N | 0.436783791 | None | None | N |
Q/S | 0.2276 | likely_benign | 0.2322 | benign | -0.531 | Destabilizing | 0.495 | N | 0.163 | neutral | None | None | None | None | N |
Q/T | 0.1815 | likely_benign | 0.1751 | benign | -0.343 | Destabilizing | 0.495 | N | 0.294 | neutral | None | None | None | None | N |
Q/V | 0.215 | likely_benign | 0.2072 | benign | 0.074 | Stabilizing | 0.828 | D | 0.355 | neutral | None | None | None | None | N |
Q/W | 0.4224 | ambiguous | 0.4094 | ambiguous | -0.232 | Destabilizing | 0.995 | D | 0.322 | neutral | None | None | None | None | N |
Q/Y | 0.3865 | ambiguous | 0.3811 | ambiguous | -0.026 | Destabilizing | 0.981 | D | 0.376 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.