Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7712 | 23359;23360;23361 | chr2:178720628;178720627;178720626 | chr2:179585355;179585354;179585353 |
N2AB | 7395 | 22408;22409;22410 | chr2:178720628;178720627;178720626 | chr2:179585355;179585354;179585353 |
N2A | 6468 | 19627;19628;19629 | chr2:178720628;178720627;178720626 | chr2:179585355;179585354;179585353 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.801 | N | 0.434 | 0.252 | 0.540518506614 | gnomAD-4.0.0 | 2.06262E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52551E-05 | None | 0 | 0 | 0 | 1.18304E-05 | 1.66617E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0832 | likely_benign | 0.0864 | benign | -0.367 | Destabilizing | 0.625 | D | 0.355 | neutral | N | 0.376308548 | None | None | I |
G/C | 0.2063 | likely_benign | 0.2176 | benign | -0.861 | Destabilizing | 0.998 | D | 0.468 | neutral | None | None | None | None | I |
G/D | 0.1813 | likely_benign | 0.2196 | benign | -0.726 | Destabilizing | 0.007 | N | 0.114 | neutral | None | None | None | None | I |
G/E | 0.1403 | likely_benign | 0.1617 | benign | -0.842 | Destabilizing | 0.005 | N | 0.166 | neutral | N | 0.319895118 | None | None | I |
G/F | 0.452 | ambiguous | 0.4685 | ambiguous | -0.864 | Destabilizing | 0.991 | D | 0.457 | neutral | None | None | None | None | I |
G/H | 0.3755 | ambiguous | 0.4141 | ambiguous | -0.789 | Destabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | I |
G/I | 0.177 | likely_benign | 0.1932 | benign | -0.273 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | I |
G/K | 0.4532 | ambiguous | 0.5059 | ambiguous | -1.113 | Destabilizing | 0.728 | D | 0.402 | neutral | None | None | None | None | I |
G/L | 0.2555 | likely_benign | 0.2835 | benign | -0.273 | Destabilizing | 0.842 | D | 0.454 | neutral | None | None | None | None | I |
G/M | 0.3217 | likely_benign | 0.3473 | ambiguous | -0.381 | Destabilizing | 0.998 | D | 0.439 | neutral | None | None | None | None | I |
G/N | 0.2457 | likely_benign | 0.2714 | benign | -0.75 | Destabilizing | 0.728 | D | 0.288 | neutral | None | None | None | None | I |
G/P | 0.5854 | likely_pathogenic | 0.609 | pathogenic | -0.266 | Destabilizing | 0.974 | D | 0.46 | neutral | None | None | None | None | I |
G/Q | 0.2932 | likely_benign | 0.3294 | benign | -0.965 | Destabilizing | 0.172 | N | 0.273 | neutral | None | None | None | None | I |
G/R | 0.3439 | ambiguous | 0.3909 | ambiguous | -0.712 | Destabilizing | 0.801 | D | 0.434 | neutral | N | 0.388488412 | None | None | I |
G/S | 0.0854 | likely_benign | 0.0907 | benign | -0.921 | Destabilizing | 0.688 | D | 0.325 | neutral | None | None | None | None | I |
G/T | 0.1139 | likely_benign | 0.1211 | benign | -0.959 | Destabilizing | 0.842 | D | 0.418 | neutral | None | None | None | None | I |
G/V | 0.1147 | likely_benign | 0.1253 | benign | -0.266 | Destabilizing | 0.891 | D | 0.455 | neutral | N | 0.373478887 | None | None | I |
G/W | 0.3431 | ambiguous | 0.3667 | ambiguous | -1.132 | Destabilizing | 0.998 | D | 0.481 | neutral | None | None | None | None | I |
G/Y | 0.3545 | ambiguous | 0.3787 | ambiguous | -0.75 | Destabilizing | 0.991 | D | 0.471 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.