Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7713 | 23362;23363;23364 | chr2:178720625;178720624;178720623 | chr2:179585352;179585351;179585350 |
N2AB | 7396 | 22411;22412;22413 | chr2:178720625;178720624;178720623 | chr2:179585352;179585351;179585350 |
N2A | 6469 | 19630;19631;19632 | chr2:178720625;178720624;178720623 | chr2:179585352;179585351;179585350 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs778331160 | -0.887 | None | N | 0.158 | 0.281 | 0.223146558224 | gnomAD-2.1.1 | 1.24E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.91E-05 | None | 0 | 9.06E-06 | 0 |
A/T | rs778331160 | -0.887 | None | N | 0.158 | 0.281 | 0.223146558224 | gnomAD-4.0.0 | 4.82194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87753E-06 | 2.931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4134 | ambiguous | 0.4553 | ambiguous | -0.772 | Destabilizing | 0.356 | N | 0.542 | neutral | None | None | None | None | N |
A/D | 0.5417 | ambiguous | 0.6095 | pathogenic | -0.6 | Destabilizing | 0.029 | N | 0.568 | neutral | N | 0.507398798 | None | None | N |
A/E | 0.4472 | ambiguous | 0.512 | ambiguous | -0.545 | Destabilizing | 0.038 | N | 0.554 | neutral | None | None | None | None | N |
A/F | 0.3236 | likely_benign | 0.3793 | ambiguous | -0.587 | Destabilizing | 0.356 | N | 0.627 | neutral | None | None | None | None | N |
A/G | 0.1509 | likely_benign | 0.1661 | benign | -1.012 | Destabilizing | None | N | 0.138 | neutral | N | 0.467722773 | None | None | N |
A/H | 0.6222 | likely_pathogenic | 0.6976 | pathogenic | -1.291 | Destabilizing | 0.356 | N | 0.595 | neutral | None | None | None | None | N |
A/I | 0.1871 | likely_benign | 0.2185 | benign | 0.179 | Stabilizing | 0.038 | N | 0.496 | neutral | None | None | None | None | N |
A/K | 0.6509 | likely_pathogenic | 0.7204 | pathogenic | -0.819 | Destabilizing | 0.038 | N | 0.555 | neutral | None | None | None | None | N |
A/L | 0.1978 | likely_benign | 0.2429 | benign | 0.179 | Stabilizing | 0.016 | N | 0.485 | neutral | None | None | None | None | N |
A/M | 0.2126 | likely_benign | 0.2557 | benign | -0.002 | Destabilizing | 0.356 | N | 0.609 | neutral | None | None | None | None | N |
A/N | 0.396 | ambiguous | 0.4627 | ambiguous | -0.693 | Destabilizing | 0.038 | N | 0.605 | neutral | None | None | None | None | N |
A/P | 0.6148 | likely_pathogenic | 0.6902 | pathogenic | -0.055 | Destabilizing | 0.055 | N | 0.638 | neutral | N | 0.495789003 | None | None | N |
A/Q | 0.4988 | ambiguous | 0.5665 | pathogenic | -0.663 | Destabilizing | 0.214 | N | 0.637 | neutral | None | None | None | None | N |
A/R | 0.5966 | likely_pathogenic | 0.6687 | pathogenic | -0.795 | Destabilizing | 0.214 | N | 0.652 | neutral | None | None | None | None | N |
A/S | 0.114 | likely_benign | 0.1222 | benign | -1.186 | Destabilizing | None | N | 0.149 | neutral | D | 0.532195539 | None | None | N |
A/T | 0.0827 | likely_benign | 0.0912 | benign | -1.001 | Destabilizing | None | N | 0.158 | neutral | N | 0.482209436 | None | None | N |
A/V | 0.1041 | likely_benign | 0.1177 | benign | -0.055 | Destabilizing | None | N | 0.154 | neutral | N | 0.394448805 | None | None | N |
A/W | 0.8056 | likely_pathogenic | 0.8591 | pathogenic | -1.068 | Destabilizing | 0.864 | D | 0.611 | neutral | None | None | None | None | N |
A/Y | 0.5255 | ambiguous | 0.5995 | pathogenic | -0.55 | Destabilizing | 0.356 | N | 0.638 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.