Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7729 | 23410;23411;23412 | chr2:178720577;178720576;178720575 | chr2:179585304;179585303;179585302 |
N2AB | 7412 | 22459;22460;22461 | chr2:178720577;178720576;178720575 | chr2:179585304;179585303;179585302 |
N2A | 6485 | 19678;19679;19680 | chr2:178720577;178720576;178720575 | chr2:179585304;179585303;179585302 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.928 | D | 0.452 | 0.583 | 0.781312296865 | gnomAD-4.0.0 | 6.84418E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1564 | likely_benign | 0.1567 | benign | -1.114 | Destabilizing | 0.012 | N | 0.153 | neutral | N | 0.515866084 | None | None | I |
P/C | 0.9175 | likely_pathogenic | 0.9114 | pathogenic | -0.685 | Destabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | I |
P/D | 0.9046 | likely_pathogenic | 0.9057 | pathogenic | -1.089 | Destabilizing | 0.401 | N | 0.515 | neutral | None | None | None | None | I |
P/E | 0.6923 | likely_pathogenic | 0.6913 | pathogenic | -1.084 | Destabilizing | 0.515 | D | 0.469 | neutral | None | None | None | None | I |
P/F | 0.8745 | likely_pathogenic | 0.8729 | pathogenic | -0.888 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | I |
P/G | 0.5962 | likely_pathogenic | 0.6003 | pathogenic | -1.379 | Destabilizing | 0.585 | D | 0.401 | neutral | None | None | None | None | I |
P/H | 0.6285 | likely_pathogenic | 0.6324 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.534 | neutral | D | 0.601563187 | None | None | I |
P/I | 0.7588 | likely_pathogenic | 0.7542 | pathogenic | -0.49 | Destabilizing | 0.944 | D | 0.579 | neutral | None | None | None | None | I |
P/K | 0.755 | likely_pathogenic | 0.7668 | pathogenic | -0.928 | Destabilizing | 0.971 | D | 0.502 | neutral | None | None | None | None | I |
P/L | 0.374 | ambiguous | 0.3749 | ambiguous | -0.49 | Destabilizing | 0.928 | D | 0.452 | neutral | D | 0.606902974 | None | None | I |
P/M | 0.7085 | likely_pathogenic | 0.7011 | pathogenic | -0.551 | Destabilizing | 0.989 | D | 0.547 | neutral | None | None | None | None | I |
P/N | 0.8288 | likely_pathogenic | 0.8289 | pathogenic | -0.769 | Destabilizing | 0.937 | D | 0.547 | neutral | None | None | None | None | I |
P/Q | 0.4914 | ambiguous | 0.4963 | ambiguous | -0.908 | Destabilizing | 0.989 | D | 0.523 | neutral | None | None | None | None | I |
P/R | 0.6192 | likely_pathogenic | 0.6391 | pathogenic | -0.454 | Destabilizing | 0.995 | D | 0.553 | neutral | D | 0.612999975 | None | None | I |
P/S | 0.3148 | likely_benign | 0.3177 | benign | -1.168 | Destabilizing | 0.217 | N | 0.195 | neutral | D | 0.531652935 | None | None | I |
P/T | 0.3755 | ambiguous | 0.3755 | ambiguous | -1.055 | Destabilizing | 0.614 | D | 0.391 | neutral | D | 0.587694028 | None | None | I |
P/V | 0.6099 | likely_pathogenic | 0.6064 | pathogenic | -0.666 | Destabilizing | 0.074 | N | 0.227 | neutral | None | None | None | None | I |
P/W | 0.9573 | likely_pathogenic | 0.9539 | pathogenic | -1.062 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
P/Y | 0.8576 | likely_pathogenic | 0.8589 | pathogenic | -0.752 | Destabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.