Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7733 | 23422;23423;23424 | chr2:178720565;178720564;178720563 | chr2:179585292;179585291;179585290 |
N2AB | 7416 | 22471;22472;22473 | chr2:178720565;178720564;178720563 | chr2:179585292;179585291;179585290 |
N2A | 6489 | 19690;19691;19692 | chr2:178720565;178720564;178720563 | chr2:179585292;179585291;179585290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.653 | 0.848 | 0.820583082347 | gnomAD-4.0.0 | 4.1063E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39781E-06 | 0 | 0 |
V/I | rs1238420893 | None | 0.434 | N | 0.294 | 0.262 | 0.581534369529 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/I | rs1238420893 | None | 0.434 | N | 0.294 | 0.262 | 0.581534369529 | gnomAD-4.0.0 | 1.21793E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.32543E-05 | 0 | 3.40229E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5674 | likely_pathogenic | 0.5997 | pathogenic | -1.5 | Destabilizing | 0.999 | D | 0.653 | neutral | D | 0.605427828 | None | None | N |
V/C | 0.967 | likely_pathogenic | 0.9683 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.971 | likely_pathogenic | 0.9763 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/E | 0.9465 | likely_pathogenic | 0.9581 | pathogenic | -1.11 | Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.631974961 | None | None | N |
V/F | 0.6148 | likely_pathogenic | 0.6234 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/G | 0.768 | likely_pathogenic | 0.7979 | pathogenic | -1.893 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.6159556 | None | None | N |
V/H | 0.9865 | likely_pathogenic | 0.9888 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/I | 0.0982 | likely_benign | 0.0973 | benign | -0.495 | Destabilizing | 0.434 | N | 0.294 | neutral | N | 0.45672192 | None | None | N |
V/K | 0.9657 | likely_pathogenic | 0.9737 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/L | 0.6026 | likely_pathogenic | 0.6263 | pathogenic | -0.495 | Destabilizing | 0.922 | D | 0.628 | neutral | D | 0.548093878 | None | None | N |
V/M | 0.4303 | ambiguous | 0.4519 | ambiguous | -0.457 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/N | 0.9338 | likely_pathogenic | 0.9467 | pathogenic | -1.134 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
V/P | 0.9546 | likely_pathogenic | 0.9614 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
V/Q | 0.9582 | likely_pathogenic | 0.9672 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
V/R | 0.9562 | likely_pathogenic | 0.9661 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/S | 0.8353 | likely_pathogenic | 0.8678 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/T | 0.5325 | ambiguous | 0.5877 | pathogenic | -1.557 | Destabilizing | 0.997 | D | 0.759 | deleterious | None | None | None | None | N |
V/W | 0.9859 | likely_pathogenic | 0.9866 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9442 | likely_pathogenic | 0.9461 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.