Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7749 | 23470;23471;23472 | chr2:178720517;178720516;178720515 | chr2:179585244;179585243;179585242 |
N2AB | 7432 | 22519;22520;22521 | chr2:178720517;178720516;178720515 | chr2:179585244;179585243;179585242 |
N2A | 6505 | 19738;19739;19740 | chr2:178720517;178720516;178720515 | chr2:179585244;179585243;179585242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.883 | N | 0.333 | 0.328 | 0.386721274199 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8638 | likely_pathogenic | 0.8842 | pathogenic | -0.609 | Destabilizing | 0.932 | D | 0.321 | neutral | None | None | None | None | N |
K/C | 0.9158 | likely_pathogenic | 0.9224 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.341 | neutral | None | None | None | None | N |
K/D | 0.9583 | likely_pathogenic | 0.966 | pathogenic | -0.088 | Destabilizing | 0.985 | D | 0.359 | neutral | None | None | None | None | N |
K/E | 0.7205 | likely_pathogenic | 0.755 | pathogenic | 0.023 | Stabilizing | 0.938 | D | 0.323 | neutral | N | 0.520957039 | None | None | N |
K/F | 0.9585 | likely_pathogenic | 0.9626 | pathogenic | -0.309 | Destabilizing | 0.995 | D | 0.354 | neutral | None | None | None | None | N |
K/G | 0.9296 | likely_pathogenic | 0.9428 | pathogenic | -0.981 | Destabilizing | 0.08 | N | 0.209 | neutral | None | None | None | None | N |
K/H | 0.5023 | ambiguous | 0.5134 | ambiguous | -1.343 | Destabilizing | 0.998 | D | 0.343 | neutral | None | None | None | None | N |
K/I | 0.7268 | likely_pathogenic | 0.7391 | pathogenic | 0.357 | Stabilizing | 0.425 | N | 0.349 | neutral | N | 0.48596318 | None | None | N |
K/L | 0.7386 | likely_pathogenic | 0.7503 | pathogenic | 0.357 | Stabilizing | 0.494 | N | 0.357 | neutral | None | None | None | None | N |
K/M | 0.6237 | likely_pathogenic | 0.6354 | pathogenic | 0.312 | Stabilizing | 0.983 | D | 0.342 | neutral | None | None | None | None | N |
K/N | 0.8779 | likely_pathogenic | 0.8918 | pathogenic | -0.437 | Destabilizing | 0.98 | D | 0.295 | neutral | N | 0.491328324 | None | None | N |
K/P | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.352 | neutral | None | None | None | None | N |
K/Q | 0.3026 | likely_benign | 0.3173 | benign | -0.522 | Destabilizing | 0.858 | D | 0.355 | neutral | N | 0.457292349 | None | None | N |
K/R | 0.0929 | likely_benign | 0.095 | benign | -0.618 | Destabilizing | 0.028 | N | 0.176 | neutral | N | 0.468258704 | None | None | N |
K/S | 0.8589 | likely_pathogenic | 0.8762 | pathogenic | -1.135 | Destabilizing | 0.721 | D | 0.126 | neutral | None | None | None | None | N |
K/T | 0.5814 | likely_pathogenic | 0.609 | pathogenic | -0.811 | Destabilizing | 0.883 | D | 0.333 | neutral | N | 0.512030911 | None | None | N |
K/V | 0.7169 | likely_pathogenic | 0.7254 | pathogenic | 0.065 | Stabilizing | 0.033 | N | 0.278 | neutral | None | None | None | None | N |
K/W | 0.9261 | likely_pathogenic | 0.9305 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.382 | neutral | None | None | None | None | N |
K/Y | 0.8895 | likely_pathogenic | 0.8949 | pathogenic | 0.127 | Stabilizing | 0.985 | D | 0.335 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.