Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7761 | 23506;23507;23508 | chr2:178720481;178720480;178720479 | chr2:179585208;179585207;179585206 |
N2AB | 7444 | 22555;22556;22557 | chr2:178720481;178720480;178720479 | chr2:179585208;179585207;179585206 |
N2A | 6517 | 19774;19775;19776 | chr2:178720481;178720480;178720479 | chr2:179585208;179585207;179585206 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.973 | D | 0.725 | 0.882 | 0.846497674913 | gnomAD-4.0.0 | 1.68046E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.83751E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9735 | likely_pathogenic | 0.977 | pathogenic | -3.093 | Highly Destabilizing | 0.97 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/C | 0.9619 | likely_pathogenic | 0.9634 | pathogenic | -2.146 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
I/D | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.726 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/E | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -3.401 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/F | 0.5105 | ambiguous | 0.5014 | ambiguous | -1.826 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | D | 0.560416452 | None | None | N |
I/G | 0.9961 | likely_pathogenic | 0.9964 | pathogenic | -3.687 | Highly Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
I/H | 0.9909 | likely_pathogenic | 0.99 | pathogenic | -3.319 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
I/K | 0.9943 | likely_pathogenic | 0.9936 | pathogenic | -2.416 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
I/L | 0.2807 | likely_benign | 0.2976 | benign | -1.281 | Destabilizing | 0.049 | N | 0.379 | neutral | D | 0.571231264 | None | None | N |
I/M | 0.4006 | ambiguous | 0.418 | ambiguous | -1.448 | Destabilizing | 0.942 | D | 0.693 | prob.neutral | D | 0.599480834 | None | None | N |
I/N | 0.9858 | likely_pathogenic | 0.984 | pathogenic | -3.155 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.649183711 | None | None | N |
I/P | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
I/Q | 0.9937 | likely_pathogenic | 0.9934 | pathogenic | -2.786 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/R | 0.9897 | likely_pathogenic | 0.989 | pathogenic | -2.43 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
I/S | 0.9806 | likely_pathogenic | 0.9809 | pathogenic | -3.659 | Highly Destabilizing | 0.999 | D | 0.812 | deleterious | D | 0.649183711 | None | None | N |
I/T | 0.9817 | likely_pathogenic | 0.9814 | pathogenic | -3.178 | Highly Destabilizing | 0.973 | D | 0.725 | prob.delet. | D | 0.623241991 | None | None | N |
I/V | 0.1462 | likely_benign | 0.1464 | benign | -1.88 | Destabilizing | 0.006 | N | 0.273 | neutral | D | 0.537508423 | None | None | N |
I/W | 0.9891 | likely_pathogenic | 0.9881 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/Y | 0.9427 | likely_pathogenic | 0.9419 | pathogenic | -2.088 | Highly Destabilizing | 0.994 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.