Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7764 | 23515;23516;23517 | chr2:178720472;178720471;178720470 | chr2:179585199;179585198;179585197 |
N2AB | 7447 | 22564;22565;22566 | chr2:178720472;178720471;178720470 | chr2:179585199;179585198;179585197 |
N2A | 6520 | 19783;19784;19785 | chr2:178720472;178720471;178720470 | chr2:179585199;179585198;179585197 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.027 | N | 0.485 | 0.049 | 0.256283259241 | gnomAD-4.0.0 | 1.59156E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
L/P | rs1413753534 | -2.22 | 0.741 | N | 0.654 | 0.42 | 0.824210825843 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/P | rs1413753534 | -2.22 | 0.741 | N | 0.654 | 0.42 | 0.824210825843 | gnomAD-4.0.0 | 1.36852E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99538E-07 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5748 | likely_pathogenic | 0.5942 | pathogenic | -2.773 | Highly Destabilizing | 0.035 | N | 0.47 | neutral | None | None | None | None | N |
L/C | 0.7674 | likely_pathogenic | 0.7608 | pathogenic | -2.812 | Highly Destabilizing | 0.001 | N | 0.362 | neutral | None | None | None | None | N |
L/D | 0.9933 | likely_pathogenic | 0.9933 | pathogenic | -3.684 | Highly Destabilizing | 0.235 | N | 0.644 | neutral | None | None | None | None | N |
L/E | 0.9632 | likely_pathogenic | 0.9641 | pathogenic | -3.498 | Highly Destabilizing | 0.38 | N | 0.645 | neutral | None | None | None | None | N |
L/F | 0.3759 | ambiguous | 0.4023 | ambiguous | -1.705 | Destabilizing | 0.001 | N | 0.358 | neutral | N | 0.494714587 | None | None | N |
L/G | 0.9252 | likely_pathogenic | 0.9329 | pathogenic | -3.253 | Highly Destabilizing | 0.149 | N | 0.604 | neutral | None | None | None | None | N |
L/H | 0.9157 | likely_pathogenic | 0.9185 | pathogenic | -2.534 | Highly Destabilizing | 0.78 | D | 0.61 | neutral | D | 0.525107752 | None | None | N |
L/I | 0.1096 | likely_benign | 0.1122 | benign | -1.385 | Destabilizing | 0.027 | N | 0.485 | neutral | N | 0.480144992 | None | None | N |
L/K | 0.9611 | likely_pathogenic | 0.9627 | pathogenic | -2.275 | Highly Destabilizing | 0.38 | N | 0.617 | neutral | None | None | None | None | N |
L/M | 0.1579 | likely_benign | 0.1703 | benign | -1.67 | Destabilizing | 0.555 | D | 0.566 | neutral | None | None | None | None | N |
L/N | 0.9401 | likely_pathogenic | 0.9426 | pathogenic | -2.714 | Highly Destabilizing | 0.005 | N | 0.453 | neutral | None | None | None | None | N |
L/P | 0.8771 | likely_pathogenic | 0.8957 | pathogenic | -1.832 | Destabilizing | 0.741 | D | 0.654 | neutral | N | 0.521997188 | None | None | N |
L/Q | 0.8529 | likely_pathogenic | 0.8647 | pathogenic | -2.656 | Highly Destabilizing | 0.555 | D | 0.615 | neutral | None | None | None | None | N |
L/R | 0.9302 | likely_pathogenic | 0.9325 | pathogenic | -1.854 | Destabilizing | 0.484 | N | 0.617 | neutral | D | 0.525107752 | None | None | N |
L/S | 0.8231 | likely_pathogenic | 0.819 | pathogenic | -3.327 | Highly Destabilizing | 0.149 | N | 0.535 | neutral | None | None | None | None | N |
L/T | 0.4545 | ambiguous | 0.4588 | ambiguous | -3.005 | Highly Destabilizing | 0.149 | N | 0.517 | neutral | None | None | None | None | N |
L/V | 0.0996 | likely_benign | 0.1032 | benign | -1.832 | Destabilizing | None | N | 0.217 | neutral | N | 0.386597326 | None | None | N |
L/W | 0.8189 | likely_pathogenic | 0.8273 | pathogenic | -2.04 | Highly Destabilizing | 0.824 | D | 0.546 | neutral | None | None | None | None | N |
L/Y | 0.8826 | likely_pathogenic | 0.896 | pathogenic | -1.858 | Destabilizing | 0.235 | N | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.