Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7769 | 23530;23531;23532 | chr2:178720457;178720456;178720455 | chr2:179585184;179585183;179585182 |
N2AB | 7452 | 22579;22580;22581 | chr2:178720457;178720456;178720455 | chr2:179585184;179585183;179585182 |
N2A | 6525 | 19798;19799;19800 | chr2:178720457;178720456;178720455 | chr2:179585184;179585183;179585182 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.027 | N | 0.433 | 0.101 | 0.332902724076 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79909E-06 | 0 | 0 |
V/F | None | None | 0.188 | N | 0.587 | 0.154 | 0.279776271856 | gnomAD-4.0.0 | 6.84269E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1553907172 | None | None | N | 0.129 | 0.122 | 0.101711395817 | gnomAD-4.0.0 | 2.05281E-06 | None | None | None | None | N | None | 5.97836E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0947 | likely_benign | 0.1008 | benign | -1.222 | Destabilizing | 0.027 | N | 0.433 | neutral | N | 0.387370904 | None | None | N |
V/C | 0.5896 | likely_pathogenic | 0.6365 | pathogenic | -0.967 | Destabilizing | 0.824 | D | 0.529 | neutral | None | None | None | None | N |
V/D | 0.4044 | ambiguous | 0.4935 | ambiguous | -0.212 | Destabilizing | 0.062 | N | 0.59 | neutral | N | 0.495058516 | None | None | N |
V/E | 0.3001 | likely_benign | 0.3598 | ambiguous | -0.151 | Destabilizing | 0.002 | N | 0.358 | neutral | None | None | None | None | N |
V/F | 0.1367 | likely_benign | 0.1803 | benign | -0.777 | Destabilizing | 0.188 | N | 0.587 | neutral | N | 0.517916733 | None | None | N |
V/G | 0.1924 | likely_benign | 0.2161 | benign | -1.591 | Destabilizing | 0.117 | N | 0.581 | neutral | N | 0.452750534 | None | None | N |
V/H | 0.4974 | ambiguous | 0.6122 | pathogenic | -1.001 | Destabilizing | 0.935 | D | 0.575 | neutral | None | None | None | None | N |
V/I | 0.0589 | likely_benign | 0.0635 | benign | -0.3 | Destabilizing | None | N | 0.129 | neutral | N | 0.4743766 | None | None | N |
V/K | 0.3758 | ambiguous | 0.4708 | ambiguous | -0.758 | Destabilizing | 0.149 | N | 0.562 | neutral | None | None | None | None | N |
V/L | 0.1261 | likely_benign | 0.1653 | benign | -0.3 | Destabilizing | None | N | 0.12 | neutral | D | 0.530229883 | None | None | N |
V/M | 0.0965 | likely_benign | 0.1117 | benign | -0.382 | Destabilizing | 0.235 | N | 0.52 | neutral | None | None | None | None | N |
V/N | 0.2179 | likely_benign | 0.2611 | benign | -0.69 | Destabilizing | 0.38 | N | 0.61 | neutral | None | None | None | None | N |
V/P | 0.6655 | likely_pathogenic | 0.7922 | pathogenic | -0.571 | Destabilizing | 0.555 | D | 0.593 | neutral | None | None | None | None | N |
V/Q | 0.3147 | likely_benign | 0.3772 | ambiguous | -0.693 | Destabilizing | 0.38 | N | 0.596 | neutral | None | None | None | None | N |
V/R | 0.2842 | likely_benign | 0.3784 | ambiguous | -0.475 | Destabilizing | 0.38 | N | 0.613 | neutral | None | None | None | None | N |
V/S | 0.1237 | likely_benign | 0.1346 | benign | -1.414 | Destabilizing | 0.081 | N | 0.573 | neutral | None | None | None | None | N |
V/T | 0.074 | likely_benign | 0.0806 | benign | -1.208 | Destabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
V/W | 0.6849 | likely_pathogenic | 0.7894 | pathogenic | -0.958 | Destabilizing | 0.935 | D | 0.611 | neutral | None | None | None | None | N |
V/Y | 0.4525 | ambiguous | 0.5422 | ambiguous | -0.619 | Destabilizing | 0.555 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.