Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7773 | 23542;23543;23544 | chr2:178720445;178720444;178720443 | chr2:179585172;179585171;179585170 |
N2AB | 7456 | 22591;22592;22593 | chr2:178720445;178720444;178720443 | chr2:179585172;179585171;179585170 |
N2A | 6529 | 19810;19811;19812 | chr2:178720445;178720444;178720443 | chr2:179585172;179585171;179585170 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs777185633 | 0.873 | None | N | 0.216 | 0.048 | 0.141422826196 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs777185633 | 0.873 | None | N | 0.216 | 0.048 | 0.141422826196 | gnomAD-4.0.0 | 5.47414E-06 | None | None | None | None | N | None | 0 | 8.94494E-05 | None | 0 | 0 | None | 0 | 0 | 1.79908E-06 | 0 | 3.31356E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2214 | likely_benign | 0.2337 | benign | -0.689 | Destabilizing | 0.004 | N | 0.452 | neutral | None | None | None | None | N |
H/C | 0.156 | likely_benign | 0.1772 | benign | 0.054 | Stabilizing | 0.497 | N | 0.524 | neutral | None | None | None | None | N |
H/D | 0.2561 | likely_benign | 0.2957 | benign | -0.457 | Destabilizing | 0.003 | N | 0.367 | neutral | N | 0.459190064 | None | None | N |
H/E | 0.2393 | likely_benign | 0.2662 | benign | -0.367 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
H/F | 0.1869 | likely_benign | 0.2007 | benign | 0.315 | Stabilizing | 0.022 | N | 0.509 | neutral | None | None | None | None | N |
H/G | 0.3595 | ambiguous | 0.3921 | ambiguous | -1.049 | Destabilizing | 0.008 | N | 0.431 | neutral | None | None | None | None | N |
H/I | 0.1301 | likely_benign | 0.1408 | benign | 0.297 | Stabilizing | 0.044 | N | 0.531 | neutral | None | None | None | None | N |
H/K | 0.2785 | likely_benign | 0.296 | benign | -0.487 | Destabilizing | 0.004 | N | 0.362 | neutral | None | None | None | None | N |
H/L | 0.0862 | likely_benign | 0.0894 | benign | 0.297 | Stabilizing | 0.007 | N | 0.437 | neutral | N | 0.38902069 | None | None | N |
H/M | 0.3176 | likely_benign | 0.3309 | benign | 0.175 | Stabilizing | 0.245 | N | 0.537 | neutral | None | None | None | None | N |
H/N | 0.0917 | likely_benign | 0.1002 | benign | -0.474 | Destabilizing | 0.014 | N | 0.395 | neutral | N | 0.440430945 | None | None | N |
H/P | 0.847 | likely_pathogenic | 0.8563 | pathogenic | -0.011 | Destabilizing | 0.065 | N | 0.543 | neutral | N | 0.496361585 | None | None | N |
H/Q | 0.1152 | likely_benign | 0.1251 | benign | -0.243 | Destabilizing | None | N | 0.186 | neutral | N | 0.332898048 | None | None | N |
H/R | 0.1244 | likely_benign | 0.129 | benign | -0.927 | Destabilizing | 0.007 | N | 0.382 | neutral | N | 0.369472137 | None | None | N |
H/S | 0.151 | likely_benign | 0.1645 | benign | -0.543 | Destabilizing | 0.001 | N | 0.267 | neutral | None | None | None | None | N |
H/T | 0.1464 | likely_benign | 0.1582 | benign | -0.352 | Destabilizing | 0.009 | N | 0.449 | neutral | None | None | None | None | N |
H/V | 0.1244 | likely_benign | 0.1291 | benign | -0.011 | Destabilizing | 0.018 | N | 0.465 | neutral | None | None | None | None | N |
H/W | 0.357 | ambiguous | 0.3698 | ambiguous | 0.51 | Stabilizing | 0.245 | N | 0.534 | neutral | None | None | None | None | N |
H/Y | 0.077 | likely_benign | 0.0837 | benign | 0.708 | Stabilizing | None | N | 0.216 | neutral | N | 0.43094467 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.