Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7805 | 23638;23639;23640 | chr2:178720229;178720228;178720227 | chr2:179584956;179584955;179584954 |
N2AB | 7488 | 22687;22688;22689 | chr2:178720229;178720228;178720227 | chr2:179584956;179584955;179584954 |
N2A | 6561 | 19906;19907;19908 | chr2:178720229;178720228;178720227 | chr2:179584956;179584955;179584954 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs369062299 | -0.573 | None | D | 0.085 | 0.172 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/A | rs369062299 | -0.573 | None | D | 0.085 | 0.172 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/A | rs369062299 | -0.573 | None | D | 0.085 | 0.172 | None | gnomAD-4.0.0 | 2.0299E-06 | None | None | None | None | N | None | 3.49455E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0835 | likely_benign | 0.0815 | benign | -0.351 | Destabilizing | None | N | 0.085 | neutral | D | 0.525861426 | None | None | N |
S/C | 0.1637 | likely_benign | 0.1521 | benign | -0.231 | Destabilizing | 0.986 | D | 0.4 | neutral | None | None | None | None | N |
S/D | 0.4019 | ambiguous | 0.3579 | ambiguous | 0.381 | Stabilizing | 0.003 | N | 0.147 | neutral | None | None | None | None | N |
S/E | 0.4236 | ambiguous | 0.3943 | ambiguous | 0.295 | Stabilizing | 0.195 | N | 0.307 | neutral | None | None | None | None | N |
S/F | 0.2239 | likely_benign | 0.2029 | benign | -0.916 | Destabilizing | 0.957 | D | 0.47 | neutral | None | None | None | None | N |
S/G | 0.1374 | likely_benign | 0.1298 | benign | -0.473 | Destabilizing | 0.244 | N | 0.329 | neutral | None | None | None | None | N |
S/H | 0.3317 | likely_benign | 0.3054 | benign | -0.981 | Destabilizing | 0.957 | D | 0.411 | neutral | None | None | None | None | N |
S/I | 0.1893 | likely_benign | 0.174 | benign | -0.16 | Destabilizing | 0.611 | D | 0.425 | neutral | None | None | None | None | N |
S/K | 0.5468 | ambiguous | 0.5023 | ambiguous | -0.359 | Destabilizing | 0.759 | D | 0.303 | neutral | None | None | None | None | N |
S/L | 0.1326 | likely_benign | 0.1272 | benign | -0.16 | Destabilizing | 0.329 | N | 0.401 | neutral | N | 0.503329739 | None | None | N |
S/M | 0.2349 | likely_benign | 0.2255 | benign | 0.054 | Stabilizing | 0.957 | D | 0.411 | neutral | None | None | None | None | N |
S/N | 0.1486 | likely_benign | 0.1315 | benign | -0.089 | Destabilizing | 0.001 | N | 0.175 | neutral | None | None | None | None | N |
S/P | 0.3982 | ambiguous | 0.3759 | ambiguous | -0.194 | Destabilizing | 0.563 | D | 0.437 | neutral | N | 0.515611097 | None | None | N |
S/Q | 0.4309 | ambiguous | 0.4074 | ambiguous | -0.317 | Destabilizing | 0.957 | D | 0.378 | neutral | None | None | None | None | N |
S/R | 0.4401 | ambiguous | 0.4042 | ambiguous | -0.211 | Destabilizing | 0.957 | D | 0.428 | neutral | None | None | None | None | N |
S/T | 0.077 | likely_benign | 0.074 | benign | -0.216 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.447670001 | None | None | N |
S/V | 0.1707 | likely_benign | 0.1622 | benign | -0.194 | Destabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | N |
S/W | 0.3951 | ambiguous | 0.3788 | ambiguous | -0.919 | Destabilizing | 0.996 | D | 0.539 | neutral | None | None | None | None | N |
S/Y | 0.1972 | likely_benign | 0.1833 | benign | -0.627 | Destabilizing | 0.986 | D | 0.473 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.