Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7816 | 23671;23672;23673 | chr2:178720196;178720195;178720194 | chr2:179584923;179584922;179584921 |
N2AB | 7499 | 22720;22721;22722 | chr2:178720196;178720195;178720194 | chr2:179584923;179584922;179584921 |
N2A | 6572 | 19939;19940;19941 | chr2:178720196;178720195;178720194 | chr2:179584923;179584922;179584921 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.997 | N | 0.719 | 0.253 | 0.215109475489 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6304 | likely_pathogenic | 0.6216 | pathogenic | -0.928 | Destabilizing | 0.468 | N | 0.448 | neutral | None | None | None | None | N |
A/D | 0.9786 | likely_pathogenic | 0.9737 | pathogenic | -2.578 | Highly Destabilizing | 0.998 | D | 0.844 | deleterious | N | 0.487585438 | None | None | N |
A/E | 0.9731 | likely_pathogenic | 0.9677 | pathogenic | -2.331 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/F | 0.9066 | likely_pathogenic | 0.8857 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
A/G | 0.2276 | likely_benign | 0.2611 | benign | -1.652 | Destabilizing | 0.025 | N | 0.429 | neutral | N | 0.494401503 | None | None | N |
A/H | 0.9886 | likely_pathogenic | 0.9847 | pathogenic | -2.175 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/I | 0.6699 | likely_pathogenic | 0.6215 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/K | 0.9959 | likely_pathogenic | 0.9942 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/L | 0.5958 | likely_pathogenic | 0.5738 | pathogenic | 0.265 | Stabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
A/M | 0.6462 | likely_pathogenic | 0.617 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/N | 0.9333 | likely_pathogenic | 0.9186 | pathogenic | -1.647 | Destabilizing | 0.989 | D | 0.844 | deleterious | None | None | None | None | N |
A/P | 0.9881 | likely_pathogenic | 0.9838 | pathogenic | -0.163 | Destabilizing | 0.999 | D | 0.787 | deleterious | N | 0.487585438 | None | None | N |
A/Q | 0.9725 | likely_pathogenic | 0.9654 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
A/R | 0.9901 | likely_pathogenic | 0.9862 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
A/S | 0.2214 | likely_benign | 0.2108 | benign | -2.016 | Highly Destabilizing | 0.859 | D | 0.693 | prob.neutral | N | 0.452844958 | None | None | N |
A/T | 0.2228 | likely_benign | 0.1915 | benign | -1.645 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | N | 0.486512738 | None | None | N |
A/V | 0.3075 | likely_benign | 0.2627 | benign | -0.163 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.482045494 | None | None | N |
A/W | 0.9947 | likely_pathogenic | 0.9929 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/Y | 0.9736 | likely_pathogenic | 0.9644 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.