Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7822 | 23689;23690;23691 | chr2:178720178;178720177;178720176 | chr2:179584905;179584904;179584903 |
N2AB | 7505 | 22738;22739;22740 | chr2:178720178;178720177;178720176 | chr2:179584905;179584904;179584903 |
N2A | 6578 | 19957;19958;19959 | chr2:178720178;178720177;178720176 | chr2:179584905;179584904;179584903 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.921 | N | 0.423 | 0.384 | 0.358134431457 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2068 | likely_benign | 0.1734 | benign | -0.156 | Destabilizing | 0.129 | N | 0.395 | neutral | None | None | None | None | I |
Q/C | 0.749 | likely_pathogenic | 0.6765 | pathogenic | -0.044 | Destabilizing | 0.983 | D | 0.417 | neutral | None | None | None | None | I |
Q/D | 0.3834 | ambiguous | 0.3521 | ambiguous | 0.132 | Stabilizing | 0.129 | N | 0.381 | neutral | None | None | None | None | I |
Q/E | 0.0809 | likely_benign | 0.0788 | benign | 0.12 | Stabilizing | 0.003 | N | 0.099 | neutral | N | 0.438338442 | None | None | I |
Q/F | 0.706 | likely_pathogenic | 0.6412 | pathogenic | -0.37 | Destabilizing | 0.94 | D | 0.446 | neutral | None | None | None | None | I |
Q/G | 0.307 | likely_benign | 0.2688 | benign | -0.335 | Destabilizing | 0.418 | N | 0.387 | neutral | None | None | None | None | I |
Q/H | 0.2353 | likely_benign | 0.2085 | benign | -0.009 | Destabilizing | 0.921 | D | 0.423 | neutral | N | 0.493290107 | None | None | I |
Q/I | 0.4691 | ambiguous | 0.4029 | ambiguous | 0.229 | Stabilizing | 0.836 | D | 0.476 | neutral | None | None | None | None | I |
Q/K | 0.1285 | likely_benign | 0.1204 | benign | 0.073 | Stabilizing | 0.183 | N | 0.415 | neutral | N | 0.508987819 | None | None | I |
Q/L | 0.141 | likely_benign | 0.1244 | benign | 0.229 | Stabilizing | 0.351 | N | 0.456 | neutral | N | 0.491346208 | None | None | I |
Q/M | 0.4345 | ambiguous | 0.3776 | ambiguous | 0.168 | Stabilizing | 0.94 | D | 0.421 | neutral | None | None | None | None | I |
Q/N | 0.3379 | likely_benign | 0.2978 | benign | -0.341 | Destabilizing | 0.593 | D | 0.467 | neutral | None | None | None | None | I |
Q/P | 0.0751 | likely_benign | 0.0636 | benign | 0.128 | Stabilizing | None | N | 0.125 | neutral | N | 0.364773685 | None | None | I |
Q/R | 0.1342 | likely_benign | 0.1269 | benign | 0.279 | Stabilizing | 0.351 | N | 0.427 | neutral | N | 0.492529638 | None | None | I |
Q/S | 0.208 | likely_benign | 0.1728 | benign | -0.341 | Destabilizing | 0.228 | N | 0.373 | neutral | None | None | None | None | I |
Q/T | 0.2406 | likely_benign | 0.2045 | benign | -0.198 | Destabilizing | 0.418 | N | 0.407 | neutral | None | None | None | None | I |
Q/V | 0.3155 | likely_benign | 0.2596 | benign | 0.128 | Stabilizing | 0.418 | N | 0.457 | neutral | None | None | None | None | I |
Q/W | 0.605 | likely_pathogenic | 0.5293 | ambiguous | -0.389 | Destabilizing | 0.983 | D | 0.444 | neutral | None | None | None | None | I |
Q/Y | 0.5032 | ambiguous | 0.4347 | ambiguous | -0.109 | Destabilizing | 0.94 | D | 0.447 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.