Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7825 | 23698;23699;23700 | chr2:178720169;178720168;178720167 | chr2:179584896;179584895;179584894 |
N2AB | 7508 | 22747;22748;22749 | chr2:178720169;178720168;178720167 | chr2:179584896;179584895;179584894 |
N2A | 6581 | 19966;19967;19968 | chr2:178720169;178720168;178720167 | chr2:179584896;179584895;179584894 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.986 | D | 0.773 | 0.58 | 0.822358949125 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85868E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1148 | likely_benign | 0.1057 | benign | -0.443 | Destabilizing | None | N | 0.239 | neutral | N | 0.493761087 | None | None | I |
S/C | 0.3506 | ambiguous | 0.3 | benign | -0.341 | Destabilizing | 0.959 | D | 0.674 | neutral | D | 0.526566237 | None | None | I |
S/D | 0.6677 | likely_pathogenic | 0.5929 | pathogenic | 0.184 | Stabilizing | 0.538 | D | 0.505 | neutral | None | None | None | None | I |
S/E | 0.7243 | likely_pathogenic | 0.6466 | pathogenic | 0.233 | Stabilizing | 0.62 | D | 0.503 | neutral | None | None | None | None | I |
S/F | 0.3606 | ambiguous | 0.244 | benign | -0.691 | Destabilizing | 0.959 | D | 0.775 | deleterious | N | 0.519564797 | None | None | I |
S/G | 0.2231 | likely_benign | 0.204 | benign | -0.709 | Destabilizing | 0.52 | D | 0.511 | neutral | None | None | None | None | I |
S/H | 0.5745 | likely_pathogenic | 0.4862 | ambiguous | -1.052 | Destabilizing | 0.997 | D | 0.674 | neutral | None | None | None | None | I |
S/I | 0.4126 | ambiguous | 0.3293 | benign | 0.163 | Stabilizing | 0.939 | D | 0.741 | deleterious | None | None | None | None | I |
S/K | 0.8955 | likely_pathogenic | 0.8502 | pathogenic | -0.223 | Destabilizing | 0.813 | D | 0.507 | neutral | None | None | None | None | I |
S/L | 0.1894 | likely_benign | 0.156 | benign | 0.163 | Stabilizing | 0.686 | D | 0.641 | neutral | None | None | None | None | I |
S/M | 0.3358 | likely_benign | 0.2695 | benign | 0.024 | Stabilizing | 0.992 | D | 0.685 | prob.neutral | None | None | None | None | I |
S/N | 0.3159 | likely_benign | 0.2713 | benign | -0.41 | Destabilizing | 0.12 | N | 0.515 | neutral | None | None | None | None | I |
S/P | 0.9296 | likely_pathogenic | 0.8969 | pathogenic | -0.004 | Destabilizing | 0.862 | D | 0.683 | prob.neutral | D | 0.526059258 | None | None | I |
S/Q | 0.7082 | likely_pathogenic | 0.6484 | pathogenic | -0.362 | Destabilizing | 0.969 | D | 0.576 | neutral | None | None | None | None | I |
S/R | 0.8359 | likely_pathogenic | 0.7874 | pathogenic | -0.285 | Destabilizing | 0.939 | D | 0.699 | prob.neutral | None | None | None | None | I |
S/T | 0.0959 | likely_benign | 0.0855 | benign | -0.354 | Destabilizing | None | N | 0.206 | neutral | N | 0.47335788 | None | None | I |
S/V | 0.353 | ambiguous | 0.2808 | benign | -0.004 | Destabilizing | 0.449 | N | 0.666 | neutral | None | None | None | None | I |
S/W | 0.6206 | likely_pathogenic | 0.4993 | ambiguous | -0.802 | Destabilizing | 0.997 | D | 0.773 | deleterious | None | None | None | None | I |
S/Y | 0.344 | ambiguous | 0.2422 | benign | -0.422 | Destabilizing | 0.986 | D | 0.773 | deleterious | D | 0.526059258 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.