Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7831 | 23716;23717;23718 | chr2:178720151;178720150;178720149 | chr2:179584878;179584877;179584876 |
N2AB | 7514 | 22765;22766;22767 | chr2:178720151;178720150;178720149 | chr2:179584878;179584877;179584876 |
N2A | 6587 | 19984;19985;19986 | chr2:178720151;178720150;178720149 | chr2:179584878;179584877;179584876 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1220028372 | 0.112 | 0.652 | N | 0.525 | 0.36 | 0.226586394389 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/H | rs1220028372 | 0.112 | 0.652 | N | 0.525 | 0.36 | 0.226586394389 | gnomAD-4.0.0 | 3.42122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 3.59804E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4635 | ambiguous | 0.4061 | ambiguous | -0.567 | Destabilizing | 0.05 | N | 0.527 | neutral | N | 0.487539893 | None | None | N |
D/C | 0.894 | likely_pathogenic | 0.8626 | pathogenic | -0.235 | Destabilizing | 0.767 | D | 0.62 | neutral | None | None | None | None | N |
D/E | 0.2319 | likely_benign | 0.172 | benign | -0.506 | Destabilizing | 0.006 | N | 0.407 | neutral | N | 0.459761173 | None | None | N |
D/F | 0.8606 | likely_pathogenic | 0.8292 | pathogenic | -0.134 | Destabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
D/G | 0.1954 | likely_benign | 0.1824 | benign | -0.887 | Destabilizing | None | N | 0.317 | neutral | N | 0.483902135 | None | None | N |
D/H | 0.6617 | likely_pathogenic | 0.6244 | pathogenic | -0.349 | Destabilizing | 0.652 | D | 0.525 | neutral | N | 0.502036524 | None | None | N |
D/I | 0.8228 | likely_pathogenic | 0.7693 | pathogenic | 0.269 | Stabilizing | 0.781 | D | 0.636 | neutral | None | None | None | None | N |
D/K | 0.7795 | likely_pathogenic | 0.7247 | pathogenic | -0.244 | Destabilizing | 0.469 | N | 0.531 | neutral | None | None | None | None | N |
D/L | 0.7549 | likely_pathogenic | 0.705 | pathogenic | 0.269 | Stabilizing | 0.638 | D | 0.646 | neutral | None | None | None | None | N |
D/M | 0.8973 | likely_pathogenic | 0.8587 | pathogenic | 0.589 | Stabilizing | 0.939 | D | 0.622 | neutral | None | None | None | None | N |
D/N | 0.1696 | likely_benign | 0.163 | benign | -0.682 | Destabilizing | None | N | 0.251 | neutral | N | 0.493937356 | None | None | N |
D/P | 0.9436 | likely_pathogenic | 0.9194 | pathogenic | 0.015 | Stabilizing | 0.066 | N | 0.551 | neutral | None | None | None | None | N |
D/Q | 0.6584 | likely_pathogenic | 0.5856 | pathogenic | -0.564 | Destabilizing | 0.397 | N | 0.501 | neutral | None | None | None | None | N |
D/R | 0.786 | likely_pathogenic | 0.7466 | pathogenic | -0.04 | Destabilizing | 0.638 | D | 0.575 | neutral | None | None | None | None | N |
D/S | 0.2842 | likely_benign | 0.2523 | benign | -0.888 | Destabilizing | 0.066 | N | 0.432 | neutral | None | None | None | None | N |
D/T | 0.6624 | likely_pathogenic | 0.5832 | pathogenic | -0.628 | Destabilizing | 0.099 | N | 0.52 | neutral | None | None | None | None | N |
D/V | 0.6049 | likely_pathogenic | 0.5406 | ambiguous | 0.015 | Stabilizing | 0.321 | N | 0.647 | neutral | N | 0.513810903 | None | None | N |
D/W | 0.9638 | likely_pathogenic | 0.954 | pathogenic | 0.09 | Stabilizing | 0.976 | D | 0.613 | neutral | None | None | None | None | N |
D/Y | 0.5192 | ambiguous | 0.4944 | ambiguous | 0.112 | Stabilizing | 0.969 | D | 0.615 | neutral | N | 0.520394268 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.