Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7838 | 23737;23738;23739 | chr2:178720130;178720129;178720128 | chr2:179584857;179584856;179584855 |
N2AB | 7521 | 22786;22787;22788 | chr2:178720130;178720129;178720128 | chr2:179584857;179584856;179584855 |
N2A | 6594 | 20005;20006;20007 | chr2:178720130;178720129;178720128 | chr2:179584857;179584856;179584855 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.153 | 0.117 | 0.159798565429 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
E/K | rs891050085 | 0.11 | 0.38 | N | 0.323 | 0.368 | 0.348764635752 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs891050085 | 0.11 | 0.38 | N | 0.323 | 0.368 | 0.348764635752 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.79386E-04 |
E/K | rs891050085 | 0.11 | 0.38 | N | 0.323 | 0.368 | 0.348764635752 | gnomAD-4.0.0 | 3.84346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78677E-06 | 0 | 2.84495E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2989 | likely_benign | 0.242 | benign | -0.315 | Destabilizing | 0.248 | N | 0.332 | neutral | N | 0.507393095 | None | None | N |
E/C | 0.9748 | likely_pathogenic | 0.9653 | pathogenic | -0.095 | Destabilizing | 0.973 | D | 0.453 | neutral | None | None | None | None | N |
E/D | 0.2523 | likely_benign | 0.2354 | benign | -0.357 | Destabilizing | None | N | 0.153 | neutral | N | 0.51724473 | None | None | N |
E/F | 0.9478 | likely_pathogenic | 0.9293 | pathogenic | -0.104 | Destabilizing | 0.852 | D | 0.418 | neutral | None | None | None | None | N |
E/G | 0.3156 | likely_benign | 0.2647 | benign | -0.507 | Destabilizing | 0.524 | D | 0.357 | neutral | N | 0.498458348 | None | None | N |
E/H | 0.8478 | likely_pathogenic | 0.8097 | pathogenic | 0.253 | Stabilizing | 0.926 | D | 0.323 | neutral | None | None | None | None | N |
E/I | 0.7725 | likely_pathogenic | 0.7046 | pathogenic | 0.154 | Stabilizing | 0.012 | N | 0.329 | neutral | None | None | None | None | N |
E/K | 0.4398 | ambiguous | 0.3792 | ambiguous | 0.488 | Stabilizing | 0.38 | N | 0.323 | neutral | N | 0.504748544 | None | None | N |
E/L | 0.7758 | likely_pathogenic | 0.7071 | pathogenic | 0.154 | Stabilizing | 0.16 | N | 0.372 | neutral | None | None | None | None | N |
E/M | 0.8151 | likely_pathogenic | 0.759 | pathogenic | 0.138 | Stabilizing | 0.646 | D | 0.4 | neutral | None | None | None | None | N |
E/N | 0.5634 | ambiguous | 0.4985 | ambiguous | -0.026 | Destabilizing | 0.081 | N | 0.31 | neutral | None | None | None | None | N |
E/P | 0.5594 | ambiguous | 0.4911 | ambiguous | 0.017 | Stabilizing | 0.287 | N | 0.353 | neutral | None | None | None | None | N |
E/Q | 0.3231 | likely_benign | 0.2774 | benign | 0.038 | Stabilizing | 0.47 | N | 0.361 | neutral | N | 0.494379744 | None | None | N |
E/R | 0.6474 | likely_pathogenic | 0.5868 | pathogenic | 0.706 | Stabilizing | 0.852 | D | 0.327 | neutral | None | None | None | None | N |
E/S | 0.4624 | ambiguous | 0.3977 | ambiguous | -0.121 | Destabilizing | 0.305 | N | 0.293 | neutral | None | None | None | None | N |
E/T | 0.5695 | likely_pathogenic | 0.4955 | ambiguous | 0.051 | Stabilizing | 0.377 | N | 0.36 | neutral | None | None | None | None | N |
E/V | 0.5353 | ambiguous | 0.4644 | ambiguous | 0.017 | Stabilizing | 0.092 | N | 0.365 | neutral | N | 0.49705277 | None | None | N |
E/W | 0.9809 | likely_pathogenic | 0.9743 | pathogenic | 0.072 | Stabilizing | 0.994 | D | 0.536 | neutral | None | None | None | None | N |
E/Y | 0.9 | likely_pathogenic | 0.8657 | pathogenic | 0.152 | Stabilizing | 0.979 | D | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.