Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7839 | 23740;23741;23742 | chr2:178720127;178720126;178720125 | chr2:179584854;179584853;179584852 |
N2AB | 7522 | 22789;22790;22791 | chr2:178720127;178720126;178720125 | chr2:179584854;179584853;179584852 |
N2A | 6595 | 20008;20009;20010 | chr2:178720127;178720126;178720125 | chr2:179584854;179584853;179584852 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | None | N | 0.233 | 0.252 | 0.166414681773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1346 | likely_benign | 0.1283 | benign | -0.255 | Destabilizing | None | N | 0.275 | neutral | None | None | None | None | N |
S/C | 0.2968 | likely_benign | 0.271 | benign | -0.18 | Destabilizing | 0.358 | N | 0.328 | neutral | N | 0.501351734 | None | None | N |
S/D | 0.3388 | likely_benign | 0.3161 | benign | -0.121 | Destabilizing | 0.027 | N | 0.324 | neutral | None | None | None | None | N |
S/E | 0.6764 | likely_pathogenic | 0.6294 | pathogenic | -0.23 | Destabilizing | 0.037 | N | 0.31 | neutral | None | None | None | None | N |
S/F | 0.4783 | ambiguous | 0.4131 | ambiguous | -0.898 | Destabilizing | 0.423 | N | 0.399 | neutral | None | None | None | None | N |
S/G | 0.0989 | likely_benign | 0.0963 | benign | -0.342 | Destabilizing | None | N | 0.139 | neutral | N | 0.494169429 | None | None | N |
S/H | 0.5814 | likely_pathogenic | 0.5389 | ambiguous | -0.858 | Destabilizing | 0.69 | D | 0.325 | neutral | None | None | None | None | N |
S/I | 0.527 | ambiguous | 0.4892 | ambiguous | -0.156 | Destabilizing | 0.12 | N | 0.416 | neutral | N | 0.505871185 | None | None | N |
S/K | 0.828 | likely_pathogenic | 0.8001 | pathogenic | -0.497 | Destabilizing | 0.021 | N | 0.319 | neutral | None | None | None | None | N |
S/L | 0.2114 | likely_benign | 0.1861 | benign | -0.156 | Destabilizing | 0.049 | N | 0.373 | neutral | None | None | None | None | N |
S/M | 0.3606 | ambiguous | 0.3228 | benign | 0.126 | Stabilizing | 0.423 | N | 0.324 | neutral | None | None | None | None | N |
S/N | 0.157 | likely_benign | 0.1452 | benign | -0.164 | Destabilizing | 0.002 | N | 0.369 | neutral | N | 0.464810375 | None | None | N |
S/P | 0.8597 | likely_pathogenic | 0.8284 | pathogenic | -0.162 | Destabilizing | None | N | 0.186 | neutral | None | None | None | None | N |
S/Q | 0.727 | likely_pathogenic | 0.6936 | pathogenic | -0.461 | Destabilizing | 0.265 | N | 0.367 | neutral | None | None | None | None | N |
S/R | 0.7915 | likely_pathogenic | 0.7603 | pathogenic | -0.236 | Destabilizing | None | N | 0.233 | neutral | N | 0.496463435 | None | None | N |
S/T | 0.1065 | likely_benign | 0.1019 | benign | -0.257 | Destabilizing | None | N | 0.172 | neutral | N | 0.474129218 | None | None | N |
S/V | 0.4592 | ambiguous | 0.4383 | ambiguous | -0.162 | Destabilizing | 0.019 | N | 0.369 | neutral | None | None | None | None | N |
S/W | 0.6027 | likely_pathogenic | 0.5402 | ambiguous | -0.934 | Destabilizing | 0.894 | D | 0.463 | neutral | None | None | None | None | N |
S/Y | 0.4134 | ambiguous | 0.3498 | ambiguous | -0.649 | Destabilizing | 0.423 | N | 0.397 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.