Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7843 | 23752;23753;23754 | chr2:178720115;178720114;178720113 | chr2:179584842;179584841;179584840 |
N2AB | 7526 | 22801;22802;22803 | chr2:178720115;178720114;178720113 | chr2:179584842;179584841;179584840 |
N2A | 6599 | 20020;20021;20022 | chr2:178720115;178720114;178720113 | chr2:179584842;179584841;179584840 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/M | None | None | 0.602 | N | 0.346 | 0.252 | 0.258779203287 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1803 | likely_benign | 0.1747 | benign | -0.779 | Destabilizing | 0.055 | N | 0.325 | neutral | None | None | None | None | I |
R/C | 0.1698 | likely_benign | 0.1669 | benign | -0.721 | Destabilizing | 0.883 | D | 0.354 | neutral | None | None | None | None | I |
R/D | 0.3426 | ambiguous | 0.339 | benign | -0.266 | Destabilizing | 0.22 | N | 0.373 | neutral | None | None | None | None | I |
R/E | 0.1802 | likely_benign | 0.1696 | benign | -0.21 | Destabilizing | 0.055 | N | 0.311 | neutral | None | None | None | None | I |
R/F | 0.3022 | likely_benign | 0.2766 | benign | -1.047 | Destabilizing | 0.667 | D | 0.359 | neutral | None | None | None | None | I |
R/G | 0.13 | likely_benign | 0.1288 | benign | -0.99 | Destabilizing | 0.042 | N | 0.361 | neutral | N | 0.494811044 | None | None | I |
R/H | 0.0758 | likely_benign | 0.0774 | benign | -1.291 | Destabilizing | 0.667 | D | 0.367 | neutral | None | None | None | None | I |
R/I | 0.1394 | likely_benign | 0.136 | benign | -0.24 | Destabilizing | 0.497 | N | 0.369 | neutral | None | None | None | None | I |
R/K | 0.0834 | likely_benign | 0.0749 | benign | -0.775 | Destabilizing | None | N | 0.166 | neutral | N | 0.475509963 | None | None | I |
R/L | 0.1543 | likely_benign | 0.1497 | benign | -0.24 | Destabilizing | 0.22 | N | 0.372 | neutral | None | None | None | None | I |
R/M | 0.1555 | likely_benign | 0.1449 | benign | -0.288 | Destabilizing | 0.602 | D | 0.346 | neutral | N | 0.491848529 | None | None | I |
R/N | 0.252 | likely_benign | 0.2398 | benign | -0.184 | Destabilizing | 0.124 | N | 0.271 | neutral | None | None | None | None | I |
R/P | 0.7635 | likely_pathogenic | 0.7671 | pathogenic | -0.401 | Destabilizing | 0.364 | N | 0.376 | neutral | None | None | None | None | I |
R/Q | 0.0775 | likely_benign | 0.076 | benign | -0.528 | Destabilizing | 0.002 | N | 0.167 | neutral | None | None | None | None | I |
R/S | 0.1801 | likely_benign | 0.1776 | benign | -0.895 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.467391912 | None | None | I |
R/T | 0.1077 | likely_benign | 0.1055 | benign | -0.7 | Destabilizing | 0.096 | N | 0.325 | neutral | N | 0.495637306 | None | None | I |
R/V | 0.1796 | likely_benign | 0.1733 | benign | -0.401 | Destabilizing | 0.22 | N | 0.39 | neutral | None | None | None | None | I |
R/W | 0.1182 | likely_benign | 0.1122 | benign | -0.817 | Destabilizing | 0.946 | D | 0.38 | neutral | N | 0.493887867 | None | None | I |
R/Y | 0.2209 | likely_benign | 0.2002 | benign | -0.461 | Destabilizing | 0.667 | D | 0.355 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.