Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7850 | 23773;23774;23775 | chr2:178720094;178720093;178720092 | chr2:179584821;179584820;179584819 |
N2AB | 7533 | 22822;22823;22824 | chr2:178720094;178720093;178720092 | chr2:179584821;179584820;179584819 |
N2A | 6606 | 20041;20042;20043 | chr2:178720094;178720093;178720092 | chr2:179584821;179584820;179584819 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.034 | D | 0.423 | 0.157 | 0.151104730317 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | None | N | 0.105 | 0.248 | 0.219573609325 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1793 | likely_benign | 0.1642 | benign | -2.081 | Highly Destabilizing | 0.01 | N | 0.285 | neutral | None | None | None | None | I |
I/C | 0.6722 | likely_pathogenic | 0.5997 | pathogenic | -1.305 | Destabilizing | 0.452 | N | 0.539 | neutral | None | None | None | None | I |
I/D | 0.5488 | ambiguous | 0.5093 | ambiguous | -1.836 | Destabilizing | 0.023 | N | 0.504 | neutral | None | None | None | None | I |
I/E | 0.3483 | ambiguous | 0.3196 | benign | -1.742 | Destabilizing | 0.017 | N | 0.481 | neutral | None | None | None | None | I |
I/F | 0.1507 | likely_benign | 0.1368 | benign | -1.344 | Destabilizing | 0.034 | N | 0.423 | neutral | D | 0.533232902 | None | None | I |
I/G | 0.5802 | likely_pathogenic | 0.5353 | ambiguous | -2.495 | Highly Destabilizing | 0.046 | N | 0.471 | neutral | None | None | None | None | I |
I/H | 0.392 | ambiguous | 0.3618 | ambiguous | -1.817 | Destabilizing | 0.255 | N | 0.558 | neutral | None | None | None | None | I |
I/K | 0.2818 | likely_benign | 0.2705 | benign | -1.385 | Destabilizing | 0.001 | N | 0.489 | neutral | None | None | None | None | I |
I/L | 0.1423 | likely_benign | 0.1309 | benign | -0.959 | Destabilizing | None | N | 0.22 | neutral | N | 0.492135641 | None | None | I |
I/M | 0.0988 | likely_benign | 0.0922 | benign | -0.821 | Destabilizing | 0.035 | N | 0.457 | neutral | D | 0.527307008 | None | None | I |
I/N | 0.2089 | likely_benign | 0.1978 | benign | -1.366 | Destabilizing | None | N | 0.338 | neutral | N | 0.494231797 | None | None | I |
I/P | 0.947 | likely_pathogenic | 0.932 | pathogenic | -1.307 | Destabilizing | 0.191 | N | 0.595 | neutral | None | None | None | None | I |
I/Q | 0.3305 | likely_benign | 0.3062 | benign | -1.442 | Destabilizing | 0.002 | N | 0.357 | neutral | None | None | None | None | I |
I/R | 0.2094 | likely_benign | 0.2032 | benign | -0.93 | Destabilizing | 0.044 | N | 0.572 | neutral | None | None | None | None | I |
I/S | 0.1897 | likely_benign | 0.1748 | benign | -2.045 | Highly Destabilizing | 0.001 | N | 0.245 | neutral | N | 0.458329712 | None | None | I |
I/T | 0.0793 | likely_benign | 0.0777 | benign | -1.831 | Destabilizing | 0.005 | N | 0.425 | neutral | N | 0.422600985 | None | None | I |
I/V | 0.0636 | likely_benign | 0.0618 | benign | -1.307 | Destabilizing | None | N | 0.105 | neutral | N | 0.411866704 | None | None | I |
I/W | 0.7461 | likely_pathogenic | 0.6992 | pathogenic | -1.558 | Destabilizing | 0.934 | D | 0.561 | neutral | None | None | None | None | I |
I/Y | 0.4534 | ambiguous | 0.416 | ambiguous | -1.294 | Destabilizing | 0.037 | N | 0.601 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.