Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7852 | 23779;23780;23781 | chr2:178720088;178720087;178720086 | chr2:179584815;179584814;179584813 |
N2AB | 7535 | 22828;22829;22830 | chr2:178720088;178720087;178720086 | chr2:179584815;179584814;179584813 |
N2A | 6608 | 20047;20048;20049 | chr2:178720088;178720087;178720086 | chr2:179584815;179584814;179584813 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | D | 0.202 | 0.202 | 0.230578612272 | gnomAD-4.0.0 | 2.05273E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51965E-05 | None | 0 | 0 | 8.99522E-07 | 1.15937E-05 | 0 |
T/I | rs1183659807 | None | 0.001 | N | 0.325 | 0.264 | 0.465633601861 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1183659807 | None | 0.001 | N | 0.325 | 0.264 | 0.465633601861 | gnomAD-4.0.0 | 3.71838E-06 | None | None | None | None | N | None | 0 | 1.66706E-05 | None | 0 | 0 | None | 0 | 0 | 4.23831E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0944 | likely_benign | 0.088 | benign | -1.157 | Destabilizing | None | N | 0.202 | neutral | D | 0.534947843 | None | None | N |
T/C | 0.4882 | ambiguous | 0.4198 | ambiguous | -0.904 | Destabilizing | 0.846 | D | 0.53 | neutral | None | None | None | None | N |
T/D | 0.6151 | likely_pathogenic | 0.5485 | ambiguous | -1.775 | Destabilizing | 0.094 | N | 0.537 | neutral | None | None | None | None | N |
T/E | 0.3909 | ambiguous | 0.3571 | ambiguous | -1.569 | Destabilizing | 0.09 | N | 0.519 | neutral | None | None | None | None | N |
T/F | 0.2414 | likely_benign | 0.2027 | benign | -0.777 | Destabilizing | 0.72 | D | 0.577 | neutral | None | None | None | None | N |
T/G | 0.381 | ambiguous | 0.3313 | benign | -1.568 | Destabilizing | 0.198 | N | 0.521 | neutral | None | None | None | None | N |
T/H | 0.3031 | likely_benign | 0.2582 | benign | -1.711 | Destabilizing | 0.881 | D | 0.553 | neutral | None | None | None | None | N |
T/I | 0.1519 | likely_benign | 0.1257 | benign | -0.075 | Destabilizing | 0.001 | N | 0.325 | neutral | N | 0.504400285 | None | None | N |
T/K | 0.2784 | likely_benign | 0.2465 | benign | -0.625 | Destabilizing | 0.121 | N | 0.523 | neutral | None | None | None | None | N |
T/L | 0.1111 | likely_benign | 0.0952 | benign | -0.075 | Destabilizing | 0.019 | N | 0.461 | neutral | None | None | None | None | N |
T/M | 0.102 | likely_benign | 0.0964 | benign | -0.166 | Destabilizing | 0.491 | N | 0.551 | neutral | None | None | None | None | N |
T/N | 0.219 | likely_benign | 0.1882 | benign | -1.343 | Destabilizing | 0.072 | N | 0.546 | neutral | N | 0.502323143 | None | None | N |
T/P | 0.8569 | likely_pathogenic | 0.8167 | pathogenic | -0.405 | Destabilizing | 0.135 | N | 0.548 | neutral | D | 0.533860845 | None | None | N |
T/Q | 0.2819 | likely_benign | 0.2552 | benign | -1.095 | Destabilizing | 0.311 | N | 0.559 | neutral | None | None | None | None | N |
T/R | 0.209 | likely_benign | 0.1824 | benign | -0.852 | Destabilizing | 0.72 | D | 0.551 | neutral | None | None | None | None | N |
T/S | 0.1338 | likely_benign | 0.1193 | benign | -1.5 | Destabilizing | None | N | 0.405 | neutral | N | 0.474051313 | None | None | N |
T/V | 0.1175 | likely_benign | 0.1024 | benign | -0.405 | Destabilizing | 0.014 | N | 0.483 | neutral | None | None | None | None | N |
T/W | 0.649 | likely_pathogenic | 0.6004 | pathogenic | -1.003 | Destabilizing | 0.984 | D | 0.615 | neutral | None | None | None | None | N |
T/Y | 0.3149 | likely_benign | 0.2706 | benign | -0.6 | Destabilizing | 0.839 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.