Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7855 | 23788;23789;23790 | chr2:178720079;178720078;178720077 | chr2:179584806;179584805;179584804 |
N2AB | 7538 | 22837;22838;22839 | chr2:178720079;178720078;178720077 | chr2:179584806;179584805;179584804 |
N2A | 6611 | 20056;20057;20058 | chr2:178720079;178720078;178720077 | chr2:179584806;179584805;179584804 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1364646771 | -1.444 | 0.001 | N | 0.279 | 0.096 | 0.260249123532 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs1364646771 | -1.444 | 0.001 | N | 0.279 | 0.096 | 0.260249123532 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1364646771 | -1.444 | 0.001 | N | 0.279 | 0.096 | 0.260249123532 | gnomAD-4.0.0 | 2.56253E-06 | None | None | None | None | N | None | 0 | 1.69503E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84527E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5357 | ambiguous | 0.4795 | ambiguous | -2.631 | Highly Destabilizing | 0.116 | N | 0.643 | neutral | None | None | None | None | N |
L/C | 0.6687 | likely_pathogenic | 0.6059 | pathogenic | -2.184 | Highly Destabilizing | 0.944 | D | 0.753 | deleterious | None | None | None | None | N |
L/D | 0.939 | likely_pathogenic | 0.9218 | pathogenic | -2.761 | Highly Destabilizing | 0.818 | D | 0.832 | deleterious | None | None | None | None | N |
L/E | 0.7911 | likely_pathogenic | 0.7442 | pathogenic | -2.624 | Highly Destabilizing | 0.818 | D | 0.811 | deleterious | None | None | None | None | N |
L/F | 0.1148 | likely_benign | 0.0874 | benign | -1.767 | Destabilizing | 0.002 | N | 0.396 | neutral | None | None | None | None | N |
L/G | 0.86 | likely_pathogenic | 0.8197 | pathogenic | -3.116 | Highly Destabilizing | 0.818 | D | 0.813 | deleterious | None | None | None | None | N |
L/H | 0.5505 | ambiguous | 0.4869 | ambiguous | -2.413 | Highly Destabilizing | 0.981 | D | 0.828 | deleterious | None | None | None | None | N |
L/I | 0.0785 | likely_benign | 0.0757 | benign | -1.267 | Destabilizing | None | N | 0.265 | neutral | None | None | None | None | N |
L/K | 0.7601 | likely_pathogenic | 0.7047 | pathogenic | -2.124 | Highly Destabilizing | 0.818 | D | 0.799 | deleterious | None | None | None | None | N |
L/M | 0.1319 | likely_benign | 0.1187 | benign | -1.19 | Destabilizing | 0.627 | D | 0.631 | neutral | N | 0.504534734 | None | None | N |
L/N | 0.8224 | likely_pathogenic | 0.7667 | pathogenic | -2.259 | Highly Destabilizing | 0.932 | D | 0.834 | deleterious | None | None | None | None | N |
L/P | 0.8894 | likely_pathogenic | 0.8758 | pathogenic | -1.698 | Destabilizing | 0.912 | D | 0.837 | deleterious | D | 0.533060697 | None | None | N |
L/Q | 0.5291 | ambiguous | 0.4804 | ambiguous | -2.283 | Highly Destabilizing | 0.912 | D | 0.811 | deleterious | D | 0.533060697 | None | None | N |
L/R | 0.6263 | likely_pathogenic | 0.5779 | pathogenic | -1.598 | Destabilizing | 0.773 | D | 0.819 | deleterious | D | 0.533060697 | None | None | N |
L/S | 0.7281 | likely_pathogenic | 0.6683 | pathogenic | -2.976 | Highly Destabilizing | 0.388 | N | 0.775 | deleterious | None | None | None | None | N |
L/T | 0.5127 | ambiguous | 0.466 | ambiguous | -2.698 | Highly Destabilizing | 0.388 | N | 0.677 | prob.neutral | None | None | None | None | N |
L/V | 0.1172 | likely_benign | 0.1116 | benign | -1.698 | Destabilizing | 0.001 | N | 0.279 | neutral | N | 0.484169519 | None | None | N |
L/W | 0.3365 | likely_benign | 0.287 | benign | -2.017 | Highly Destabilizing | 0.981 | D | 0.797 | deleterious | None | None | None | None | N |
L/Y | 0.4931 | ambiguous | 0.4058 | ambiguous | -1.793 | Destabilizing | 0.527 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.