Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7863 | 23812;23813;23814 | chr2:178720055;178720054;178720053 | chr2:179584782;179584781;179584780 |
N2AB | 7546 | 22861;22862;22863 | chr2:178720055;178720054;178720053 | chr2:179584782;179584781;179584780 |
N2A | 6619 | 20080;20081;20082 | chr2:178720055;178720054;178720053 | chr2:179584782;179584781;179584780 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1553906488 | None | 0.794 | D | 0.56 | 0.463 | 0.259761712551 | gnomAD-4.0.0 | 4.10585E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39739E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0674 | likely_benign | 0.0612 | benign | -0.833 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.435223566 | None | None | N |
S/C | 0.1712 | likely_benign | 0.139 | benign | -0.536 | Destabilizing | 0.794 | D | 0.527 | neutral | D | 0.527135668 | None | None | N |
S/D | 0.455 | ambiguous | 0.4438 | ambiguous | 0.027 | Stabilizing | 0.593 | D | 0.447 | neutral | None | None | None | None | N |
S/E | 0.5143 | ambiguous | 0.5049 | ambiguous | -0.018 | Destabilizing | 0.418 | N | 0.437 | neutral | None | None | None | None | N |
S/F | 0.2989 | likely_benign | 0.2535 | benign | -1.296 | Destabilizing | 0.001 | N | 0.295 | neutral | N | 0.511905022 | None | None | N |
S/G | 0.0836 | likely_benign | 0.0776 | benign | -1.004 | Destabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | N |
S/H | 0.4185 | ambiguous | 0.3953 | ambiguous | -1.518 | Destabilizing | 0.94 | D | 0.533 | neutral | None | None | None | None | N |
S/I | 0.2116 | likely_benign | 0.1857 | benign | -0.491 | Destabilizing | 0.264 | N | 0.531 | neutral | None | None | None | None | N |
S/K | 0.6186 | likely_pathogenic | 0.6102 | pathogenic | -0.53 | Destabilizing | 0.418 | N | 0.427 | neutral | None | None | None | None | N |
S/L | 0.131 | likely_benign | 0.1167 | benign | -0.491 | Destabilizing | 0.129 | N | 0.417 | neutral | None | None | None | None | N |
S/M | 0.2656 | likely_benign | 0.2318 | benign | -0.084 | Destabilizing | 0.836 | D | 0.541 | neutral | None | None | None | None | N |
S/N | 0.1736 | likely_benign | 0.1649 | benign | -0.393 | Destabilizing | 0.418 | N | 0.483 | neutral | None | None | None | None | N |
S/P | 0.5527 | ambiguous | 0.4666 | ambiguous | -0.576 | Destabilizing | 0.794 | D | 0.56 | neutral | D | 0.538149578 | None | None | N |
S/Q | 0.4844 | ambiguous | 0.4705 | ambiguous | -0.65 | Destabilizing | 0.836 | D | 0.521 | neutral | None | None | None | None | N |
S/R | 0.4602 | ambiguous | 0.4716 | ambiguous | -0.376 | Destabilizing | 0.836 | D | 0.565 | neutral | None | None | None | None | N |
S/T | 0.0982 | likely_benign | 0.0879 | benign | -0.527 | Destabilizing | 0.183 | N | 0.448 | neutral | N | 0.512569629 | None | None | N |
S/V | 0.2295 | likely_benign | 0.1957 | benign | -0.576 | Destabilizing | 0.002 | N | 0.322 | neutral | None | None | None | None | N |
S/W | 0.4711 | ambiguous | 0.434 | ambiguous | -1.2 | Destabilizing | 0.983 | D | 0.557 | neutral | None | None | None | None | N |
S/Y | 0.2644 | likely_benign | 0.2301 | benign | -0.946 | Destabilizing | 0.487 | N | 0.581 | neutral | N | 0.520298813 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.