Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7900 | 23923;23924;23925 | chr2:178719794;178719793;178719792 | chr2:179584521;179584520;179584519 |
N2AB | 7583 | 22972;22973;22974 | chr2:178719794;178719793;178719792 | chr2:179584521;179584520;179584519 |
N2A | 6656 | 20191;20192;20193 | chr2:178719794;178719793;178719792 | chr2:179584521;179584520;179584519 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.645 | N | 0.463 | 0.499 | 0.67724314777 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4655 | ambiguous | 0.4635 | ambiguous | -1.77 | Destabilizing | 0.645 | D | 0.463 | neutral | N | 0.503195289 | None | None | I |
V/C | 0.9345 | likely_pathogenic | 0.9249 | pathogenic | -1.704 | Destabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | I |
V/D | 0.9568 | likely_pathogenic | 0.9371 | pathogenic | -1.7 | Destabilizing | 0.928 | D | 0.765 | deleterious | D | 0.575922386 | None | None | I |
V/E | 0.8717 | likely_pathogenic | 0.8538 | pathogenic | -1.655 | Destabilizing | 0.945 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/F | 0.5335 | ambiguous | 0.4798 | ambiguous | -1.49 | Destabilizing | 0.864 | D | 0.729 | prob.delet. | D | 0.535661725 | None | None | I |
V/G | 0.7098 | likely_pathogenic | 0.6669 | pathogenic | -2.127 | Highly Destabilizing | 0.928 | D | 0.753 | deleterious | D | 0.534598541 | None | None | I |
V/H | 0.9686 | likely_pathogenic | 0.9615 | pathogenic | -1.632 | Destabilizing | 0.995 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/I | 0.1085 | likely_benign | 0.096 | benign | -0.861 | Destabilizing | 0.006 | N | 0.244 | neutral | N | 0.493586957 | None | None | I |
V/K | 0.9171 | likely_pathogenic | 0.9141 | pathogenic | -1.308 | Destabilizing | 0.945 | D | 0.734 | prob.delet. | None | None | None | None | I |
V/L | 0.505 | ambiguous | 0.4682 | ambiguous | -0.861 | Destabilizing | 0.114 | N | 0.401 | neutral | D | 0.528024722 | None | None | I |
V/M | 0.349 | ambiguous | 0.3282 | benign | -0.894 | Destabilizing | 0.894 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/N | 0.9017 | likely_pathogenic | 0.8624 | pathogenic | -1.273 | Destabilizing | 0.981 | D | 0.754 | deleterious | None | None | None | None | I |
V/P | 0.9798 | likely_pathogenic | 0.9708 | pathogenic | -1.131 | Destabilizing | 0.981 | D | 0.749 | deleterious | None | None | None | None | I |
V/Q | 0.8826 | likely_pathogenic | 0.8653 | pathogenic | -1.419 | Destabilizing | 0.981 | D | 0.728 | prob.delet. | None | None | None | None | I |
V/R | 0.8828 | likely_pathogenic | 0.8695 | pathogenic | -0.875 | Destabilizing | 0.945 | D | 0.755 | deleterious | None | None | None | None | I |
V/S | 0.7181 | likely_pathogenic | 0.6783 | pathogenic | -1.908 | Destabilizing | 0.945 | D | 0.745 | deleterious | None | None | None | None | I |
V/T | 0.5063 | ambiguous | 0.5177 | ambiguous | -1.737 | Destabilizing | 0.707 | D | 0.678 | prob.neutral | None | None | None | None | I |
V/W | 0.9879 | likely_pathogenic | 0.9842 | pathogenic | -1.66 | Destabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | I |
V/Y | 0.9376 | likely_pathogenic | 0.9213 | pathogenic | -1.335 | Destabilizing | 0.945 | D | 0.724 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.