Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7916 | 23971;23972;23973 | chr2:178719746;178719745;178719744 | chr2:179584473;179584472;179584471 |
N2AB | 7599 | 23020;23021;23022 | chr2:178719746;178719745;178719744 | chr2:179584473;179584472;179584471 |
N2A | 6672 | 20239;20240;20241 | chr2:178719746;178719745;178719744 | chr2:179584473;179584472;179584471 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs764130233 | 0.367 | 0.467 | D | 0.411 | 0.544 | 0.503930629158 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 9.29E-05 | 1.78E-05 | 0 |
P/R | rs764130233 | 0.367 | 0.467 | D | 0.411 | 0.544 | 0.503930629158 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
P/R | rs764130233 | 0.367 | 0.467 | D | 0.411 | 0.544 | 0.503930629158 | gnomAD-4.0.0 | 2.29309E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.3439E-04 | 0 | 1.69534E-05 | 0 | 3.20266E-05 |
P/S | rs1264639309 | None | 0.999 | D | 0.614 | 0.609 | 0.568535626052 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02517E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5759 | likely_pathogenic | 0.6271 | pathogenic | -0.32 | Destabilizing | 0.992 | D | 0.597 | neutral | D | 0.542034962 | None | None | I |
P/C | 0.9688 | likely_pathogenic | 0.9744 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/D | 0.9328 | likely_pathogenic | 0.9449 | pathogenic | -0.325 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
P/E | 0.8027 | likely_pathogenic | 0.8493 | pathogenic | -0.447 | Destabilizing | 0.998 | D | 0.616 | neutral | None | None | None | None | I |
P/F | 0.9814 | likely_pathogenic | 0.9814 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/G | 0.8663 | likely_pathogenic | 0.8732 | pathogenic | -0.395 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | I |
P/H | 0.8596 | likely_pathogenic | 0.8821 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | I |
P/I | 0.912 | likely_pathogenic | 0.916 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
P/K | 0.8441 | likely_pathogenic | 0.8737 | pathogenic | -0.35 | Destabilizing | 0.988 | D | 0.615 | neutral | None | None | None | None | I |
P/L | 0.7023 | likely_pathogenic | 0.7385 | pathogenic | -0.272 | Destabilizing | 0.998 | D | 0.647 | neutral | D | 0.625708311 | None | None | I |
P/M | 0.8919 | likely_pathogenic | 0.9062 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
P/N | 0.926 | likely_pathogenic | 0.9366 | pathogenic | -0.109 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
P/Q | 0.7564 | likely_pathogenic | 0.8013 | pathogenic | -0.347 | Destabilizing | 0.998 | D | 0.589 | neutral | D | 0.576433046 | None | None | I |
P/R | 0.7429 | likely_pathogenic | 0.7911 | pathogenic | 0.132 | Stabilizing | 0.467 | N | 0.411 | neutral | D | 0.609053176 | None | None | I |
P/S | 0.7696 | likely_pathogenic | 0.8087 | pathogenic | -0.419 | Destabilizing | 0.999 | D | 0.614 | neutral | D | 0.546300923 | None | None | I |
P/T | 0.6123 | likely_pathogenic | 0.6504 | pathogenic | -0.448 | Destabilizing | 0.999 | D | 0.611 | neutral | D | 0.612303482 | None | None | I |
P/V | 0.8077 | likely_pathogenic | 0.8153 | pathogenic | -0.258 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
P/W | 0.9825 | likely_pathogenic | 0.9854 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/Y | 0.9713 | likely_pathogenic | 0.9723 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.