Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7918 | 23977;23978;23979 | chr2:178719740;178719739;178719738 | chr2:179584467;179584466;179584465 |
N2AB | 7601 | 23026;23027;23028 | chr2:178719740;178719739;178719738 | chr2:179584467;179584466;179584465 |
N2A | 6674 | 20245;20246;20247 | chr2:178719740;178719739;178719738 | chr2:179584467;179584466;179584465 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs767543848 | -1.462 | 0.032 | N | 0.353 | 0.453 | 0.444706120422 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.56226E-04 | None | 0 | None | 0 | 0 | 0 |
L/F | rs767543848 | -1.462 | 0.032 | N | 0.353 | 0.453 | 0.444706120422 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.87297E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs767543848 | -1.462 | 0.032 | N | 0.353 | 0.453 | 0.444706120422 | gnomAD-4.0.0 | 3.84394E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.27696E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8316 | likely_pathogenic | 0.8255 | pathogenic | -2.029 | Highly Destabilizing | 0.86 | D | 0.592 | neutral | None | None | None | None | I |
L/C | 0.8802 | likely_pathogenic | 0.8937 | pathogenic | -1.455 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | I |
L/D | 0.9907 | likely_pathogenic | 0.9905 | pathogenic | -0.997 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | I |
L/E | 0.9636 | likely_pathogenic | 0.9597 | pathogenic | -0.911 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | I |
L/F | 0.6247 | likely_pathogenic | 0.6373 | pathogenic | -1.303 | Destabilizing | 0.032 | N | 0.353 | neutral | N | 0.488267358 | None | None | I |
L/G | 0.9625 | likely_pathogenic | 0.9597 | pathogenic | -2.448 | Highly Destabilizing | 0.978 | D | 0.763 | deleterious | None | None | None | None | I |
L/H | 0.9295 | likely_pathogenic | 0.9316 | pathogenic | -1.565 | Destabilizing | 0.997 | D | 0.718 | prob.delet. | D | 0.527869683 | None | None | I |
L/I | 0.1712 | likely_benign | 0.1809 | benign | -0.905 | Destabilizing | 0.126 | N | 0.301 | neutral | D | 0.523343983 | None | None | I |
L/K | 0.9404 | likely_pathogenic | 0.9357 | pathogenic | -1.27 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/M | 0.337 | likely_benign | 0.3516 | ambiguous | -0.835 | Destabilizing | 0.978 | D | 0.657 | neutral | None | None | None | None | I |
L/N | 0.947 | likely_pathogenic | 0.9399 | pathogenic | -1.184 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | I |
L/P | 0.5769 | likely_pathogenic | 0.6197 | pathogenic | -1.251 | Destabilizing | 0.99 | D | 0.763 | deleterious | N | 0.416341443 | None | None | I |
L/Q | 0.896 | likely_pathogenic | 0.8953 | pathogenic | -1.238 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
L/R | 0.9017 | likely_pathogenic | 0.9007 | pathogenic | -0.813 | Destabilizing | 0.971 | D | 0.742 | deleterious | D | 0.527616193 | None | None | I |
L/S | 0.9537 | likely_pathogenic | 0.9534 | pathogenic | -2.009 | Highly Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/T | 0.8416 | likely_pathogenic | 0.844 | pathogenic | -1.778 | Destabilizing | 0.978 | D | 0.667 | neutral | None | None | None | None | I |
L/V | 0.2129 | likely_benign | 0.2214 | benign | -1.251 | Destabilizing | 0.489 | N | 0.527 | neutral | N | 0.505566299 | None | None | I |
L/W | 0.8885 | likely_pathogenic | 0.8969 | pathogenic | -1.357 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/Y | 0.8967 | likely_pathogenic | 0.896 | pathogenic | -1.142 | Destabilizing | 0.915 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.