Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC791823977;23978;23979 chr2:178719740;178719739;178719738chr2:179584467;179584466;179584465
N2AB760123026;23027;23028 chr2:178719740;178719739;178719738chr2:179584467;179584466;179584465
N2A667420245;20246;20247 chr2:178719740;178719739;178719738chr2:179584467;179584466;179584465
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-64
  • Domain position: 30
  • Structural Position: 44
  • Q(SASA): 0.2563
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs767543848 -1.462 0.032 N 0.353 0.453 0.444706120422 gnomAD-2.1.1 1.79E-05 None None None None I None 0 0 None 0 2.56226E-04 None 0 None 0 0 0
L/F rs767543848 -1.462 0.032 N 0.353 0.453 0.444706120422 gnomAD-3.1.2 1.31E-05 None None None None I None 0 0 0 0 3.87297E-04 None 0 0 0 0 0
L/F rs767543848 -1.462 0.032 N 0.353 0.453 0.444706120422 gnomAD-4.0.0 3.84394E-06 None None None None I None 0 0 None 0 7.27696E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8316 likely_pathogenic 0.8255 pathogenic -2.029 Highly Destabilizing 0.86 D 0.592 neutral None None None None I
L/C 0.8802 likely_pathogenic 0.8937 pathogenic -1.455 Destabilizing 0.998 D 0.628 neutral None None None None I
L/D 0.9907 likely_pathogenic 0.9905 pathogenic -0.997 Destabilizing 0.993 D 0.769 deleterious None None None None I
L/E 0.9636 likely_pathogenic 0.9597 pathogenic -0.911 Destabilizing 0.993 D 0.773 deleterious None None None None I
L/F 0.6247 likely_pathogenic 0.6373 pathogenic -1.303 Destabilizing 0.032 N 0.353 neutral N 0.488267358 None None I
L/G 0.9625 likely_pathogenic 0.9597 pathogenic -2.448 Highly Destabilizing 0.978 D 0.763 deleterious None None None None I
L/H 0.9295 likely_pathogenic 0.9316 pathogenic -1.565 Destabilizing 0.997 D 0.718 prob.delet. D 0.527869683 None None I
L/I 0.1712 likely_benign 0.1809 benign -0.905 Destabilizing 0.126 N 0.301 neutral D 0.523343983 None None I
L/K 0.9404 likely_pathogenic 0.9357 pathogenic -1.27 Destabilizing 0.978 D 0.739 prob.delet. None None None None I
L/M 0.337 likely_benign 0.3516 ambiguous -0.835 Destabilizing 0.978 D 0.657 neutral None None None None I
L/N 0.947 likely_pathogenic 0.9399 pathogenic -1.184 Destabilizing 0.993 D 0.763 deleterious None None None None I
L/P 0.5769 likely_pathogenic 0.6197 pathogenic -1.251 Destabilizing 0.99 D 0.763 deleterious N 0.416341443 None None I
L/Q 0.896 likely_pathogenic 0.8953 pathogenic -1.238 Destabilizing 0.998 D 0.731 prob.delet. None None None None I
L/R 0.9017 likely_pathogenic 0.9007 pathogenic -0.813 Destabilizing 0.971 D 0.742 deleterious D 0.527616193 None None I
L/S 0.9537 likely_pathogenic 0.9534 pathogenic -2.009 Highly Destabilizing 0.978 D 0.739 prob.delet. None None None None I
L/T 0.8416 likely_pathogenic 0.844 pathogenic -1.778 Destabilizing 0.978 D 0.667 neutral None None None None I
L/V 0.2129 likely_benign 0.2214 benign -1.251 Destabilizing 0.489 N 0.527 neutral N 0.505566299 None None I
L/W 0.8885 likely_pathogenic 0.8969 pathogenic -1.357 Destabilizing 0.998 D 0.695 prob.neutral None None None None I
L/Y 0.8967 likely_pathogenic 0.896 pathogenic -1.142 Destabilizing 0.915 D 0.699 prob.neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.